Crystal structure of the Fab portion of Olokizumab in complex with IL- 6
External Resource: Annotation
- Domain Annotation: SCOP/SCOPe Classification
- Domain Annotation: SCOP2 Classification
- Domain Annotation: ECOD Classification
- Domain Annotation: CATH
- IMGT Antibody Annotation
- SAbDab Antibody Annotation
- Thera-SAbDab Antibody Annotation
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| D | Aldo_ket_red | e4cniD1 | A: a/b three-layered sandwiches | X: jelly-roll | H: Galactose-binding domain-like | T: Galactose-binding domain-like | F: Aldo_ket_red | ECOD (v294.1) |
| C | Aldo_ket_red | e4cniC1 | A: a/b three-layered sandwiches | X: jelly-roll | H: Galactose-binding domain-like | T: Galactose-binding domain-like | F: Aldo_ket_red | ECOD (v294.1) |
| F [auth L] | Aldo_ket_red | e4cniL1 | A: a/b three-layered sandwiches | X: jelly-roll | H: Galactose-binding domain-like | T: Galactose-binding domain-like | F: Aldo_ket_red | ECOD (v294.1) |
| B | Aldo_ket_red | e4cniB1 | A: a/b three-layered sandwiches | X: jelly-roll | H: Galactose-binding domain-like | T: Galactose-binding domain-like | F: Aldo_ket_red | ECOD (v294.1) |
| E [auth H] | Aldo_ket_red | e4cniH1 | A: a/b three-layered sandwiches | X: jelly-roll | H: Galactose-binding domain-like | T: Galactose-binding domain-like | F: Aldo_ket_red | ECOD (v294.1) |
| A | Aldo_ket_red | e4cniA1 | A: a/b three-layered sandwiches | X: jelly-roll | H: Galactose-binding domain-like | T: Galactose-binding domain-like | F: Aldo_ket_red | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| D | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
| C | 1.20.1250.10 | Mainly Alpha | Up-down Bundle | Growth Hormone | Chain: A | CATH (4.3.0) |
| F [auth L] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| E [auth H] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| B, F [auth L] | Olokizumab Fab | L-KAPPA | Humanized (humanized) | IGKV1-17*01, IGKJ2*01, IGKC*01 | V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA | IG | FAB-GAMMA-4_KAPPA | IMGT (202611-0) |
| A, E [auth H] | Olokizumab Fab | VH-CH1 | Humanized (humanized) | IGHV3-72*01, IGHJ4*01, IGHJ4*02, IGHJ4*03, IGHG4*01, IGHG4*04 | V-DOMAIN VH, C-DOMAIN CH1 | IG | FAB-GAMMA-4_KAPPA | IMGT (202611-0) |
SAbDab Antibody Annotation SAbDab Database Homepage
| Chain | Chain Class | Chain Subclass | Chain Type | Antigen Name(s) | Provenance Source |
|---|---|---|---|---|---|
| B, F [auth L] | Light Chain | IGKV1 | Kappa | interleukin-6 | SAbDab (2026-03-27) |
| A, E [auth H] | Heavy Chain | IGHV3 | - | interleukin-6 | SAbDab (2026-03-27) |
Thera-SAbDab Antibody Annotation Thera-SAbDab Database Homepage
| Chain | Name | Target | Provenance Source |
|---|---|---|---|
| B, F [auth L] | Olokizumab | IL6 | Therapeutic SAbDab (2026-03-27) |
| A, E [auth H] | Olokizumab | IL6 | Therapeutic SAbDab (2026-03-27) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00489 | Interleukin-6/G-CSF/MGF family (IL6) | Interleukin-6/G-CSF/MGF family | Domain | ||
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR030473 | Interleukin-6/GCSF/MGF, conserved site | Conserved Site | |
| IPR009079 | Four-helical cytokine-like, core | Homologous Superfamily | |
| IPR003574 | Interleukin-6-like | Family | |
| IPR030474 | Interleukin-6/GCSF/MGF | Family |














