4CSY
E-selectin lectin, EGF-like and two SCR domains complexed with Sialyl Lewis X
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | C-type lectin-like | 8035760 | 3001261 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | EGF/Laminin-like | 8035761 | 3000412 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | EGF/Laminin-like | 8035761 | 3000412 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | C-type lectin-like | 8035760 | 3001261 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Lectin_C | e4csyB3 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: Lectin_C | ECOD (1.6) |
B | hEGF | e4csyB4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF | ECOD (1.6) |
B | Sushi | e4csyB2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
A | Lectin_C | e4csyA3 | A: a+b complex topology | X: C-type lectin-like (From Homology) | H: C-type lectin-like | T: C-type lectin-like | F: Lectin_C | ECOD (1.6) |
A | hEGF | e4csyA4 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: EGF/Laminin | F: hEGF | ECOD (1.6) |
A | Sushi | e4csyA2 | A: few secondary structure elements | X: EGF-like | H: EGF-related | T: Complement control module/SCR domain | F: Sushi | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.10.100.10 | Alpha Beta | Roll | Mannose-Binding Protein A | Chain A | CATH (4.3.0) |
B | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
B | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
A | 3.10.100.10 | Alpha Beta | Roll | Mannose-Binding Protein A | Chain A | CATH (4.3.0) |
A | 2.10.25.10 | Mainly Beta | Ribbon | Laminin | Laminin | CATH (4.3.0) |
A | 2.10.70.10 | Mainly Beta | Ribbon | Complement Module | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00008 | EGF-like domain (EGF) | EGF-like domain | There is no clear separation between noise and signal. Pfam:PF00053 is very similar, but has 8 instead of 6 conserved cysteines. Includes some cytokine receptors. The EGF domain misses the N-terminus regions of the Ca2+ binding EGF domains (this is t ... | Domain | |
PF00084 | Sushi repeat (SCR repeat) (Sushi) | Sushi repeat (SCR repeat) | - | Domain | |
PF00059 | Lectin C-type domain (Lectin_C) | Lectin C-type domain | This family includes both long and short form C-type | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR016187 | C-type lectin fold | Homologous Superfamily | |
IPR001304 | C-type lectin-like | Domain | |
IPR016186 | C-type lectin-like/link domain superfamily | Homologous Superfamily | |
IPR000436 | Sushi/SCR/CCP domain | Domain | |
IPR000742 | EGF-like domain | Domain | |
IPR002396 | Selectin superfamily | Family | |
IPR035976 | Sushi/SCR/CCP superfamily | Homologous Superfamily | |
IPR050350 | Complement & Cell Adhesion Regulators | Family | |
IPR033991 | Selectin, C-type lectin-like domain | Domain | |
IPR018378 | C-type lectin, conserved site | Conserved Site |