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 4DE9 | pdb_00004de9

LytR-CPS2A-psr family protein YwtF (TagT) with bound octaprenyl pyrophosphate lipid

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ASCOP2 FamilyLytR/CPS2A/Psr-like 8044920 4004205 SCOP2 (2022-06-29)
ASCOP2 SuperfamilyLytR-like 8053759 3002222 SCOP2 (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
ANTP_transf_2e4de9A1 A: alpha arraysX: cradle loop barrelH: RIFT-relatedT: acid proteaseF: NTP_transf_2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
A3.30.420.590 Alpha Beta 2-Layer Sandwich Nucleotidyltransferase domain 5CATH (4.3.0)
A3.40.630.190 Alpha Beta 3-Layer(aba) Sandwich Aminopeptidase LCP proteinCATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF03816LytR_cpsA_psr family (LytR_cpsA_psr)LytR_cpsA_psr familyThe entry represents a domain found in a number of LCP (LytR-Cps2A-Psr) family proteins. LCP family is also known as TagU family. LCP family proteins have been reported to be required for the synthesis of anionic cell wall polymers [1]. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Putative transcriptional regulator ywtF- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR050922LytR/CpsA/Psr cell wall biosynthesisFamily
IPR004474Cell envelope-related transcriptional attenuator domainDomain