Annotations: 4EWC

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
A	EUF08091	e4ewcA3	A: alpha bundles	X: Helical bundle in flu nucleocapsid protein (From Topology)	H: Helical bundle in flu nucleocapsid protein (From Topology)	T: Helical bundle in flu nucleocapsid protein	F: EUF08091	ECOD (1.6)
A	EUF08425	e4ewcA1	A: a+b two layers	X: Salmon anemia virus nucleoprotein N-terminal domain (From Topology)	H: Salmon anemia virus nucleoprotein N-terminal domain (From Topology)	T: Salmon anemia virus nucleoprotein N-terminal domain	F: EUF08425	ECOD (1.6)
A	EUF08567	e4ewcA2	A: a+b complex topology	X: Flu NP-like (From Topology)	H: Flu NP-like (From Topology)	T: Flu NP-like	F: EUF08567	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A	2.20.25.560	Mainly Beta	Single Sheet	N-terminal domain of TfIIb		CATH (4.3.0)
A	1.20.120.1660	Mainly Alpha	Up-down Bundle	Four Helix Bundle (Hemerythrin (Met), subunit A)		CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A	PF21453	Infectious salmon anemia virus nucleoprotein, helical bundle (NCAP_ISAV_hel)	Infectious salmon anemia virus nucleoprotein, helical bundle	This entry represents the helical bundle of Infectious salmon anemia virus (ISAV) nucleoprotein that forms the head domain described in [1]. The head and body domains from this protein affect the equilibrium-state RNA binding.	Domain
A	PF21422	Orthomyxovirus nucleoprotein, C-terminal (NP_C_Orthomyx)	Orthomyxovirus nucleoprotein, C-terminal	This entry represents a domain found in the nucleoprotein from the orthomyxovirus Infectious salmon anemia virus [1]. This protein is similar to that in Influenza virus and consists of a head and a body domain [1]. This entry represents the tail loop ...	This entry represents a domain found in the nucleoprotein from the orthomyxovirus Infectious salmon anemia virus [1]. This protein is similar to that in Influenza virus and consists of a head and a body domain [1]. This entry represents the tail loop which plays a role in oligomerisation. It folds into an extended beta-hairpin that protrudes into a deep pocket in a neighbouring subunit to mediate dimer formation.	Domain
A	PF21451	Salmon anemia virus nucleoprotein N-terminal domain (NCAP_ISAV_N)	Salmon anemia virus nucleoprotein N-terminal domain	This entry represents the N-terminal domain of the Salmon anemia virus nucleoprotein which has an alpha/beta fold [1] consisting of three anti-parallel beta-strands and two alpha helices in an extended shape and interacts with the rest of the structu ...	This entry represents the N-terminal domain of the Salmon anemia virus nucleoprotein which has an alpha/beta fold [1] consisting of three anti-parallel beta-strands and two alpha helices in an extended shape and interacts with the rest of the structure [1]. This domain may regulate the dynamics of the NP RNA binding.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A	Putative nucleoprotein	-	biological process involved in interspecies interaction between organisms viral penetration into host nucleus intracellular transport of virus viral process viral life cycle transport of virus biological process involved in symbiotic interaction symbiont entry into host cell symbiont entry into host biological process involved in interaction with host	host cellular component cellular anatomical structure host cell host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host cell nucleolus host cell nuclear part host intracellular organelle viral nucleocapsid viral capsid virion component host cellular component cellular anatomical structure host cell host intracellular membrane-bounded organelle host intracellular part host cell part host intracellular region host cell nucleus host cell nucleolus host cell nuclear part host intracellular organelle viral nucleocapsid viral capsid virion component helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A	IPR049057	Infectious salmon anemia virus nucleoprotein, N-terminal domain	Domain
A	IPR048894	Infectious salmon anemia virus nucleoprotein, C-terminal	Domain
A	IPR049060	Infectious salmon anemia virus nucleoprotein, helical bundle	Domain

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.