4FSL
Crystal structure of beta-site app-cleaving enzyme 1 (BACE-DB-MUT) complex with N-(N-(4- acetamido-3-chloro-5-methylbenzyl)carbamimidoyl)-3-(4- methoxyphenyl)-5-methyl-4-isothiazolecarboxamide
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | d4fsla_ | All beta proteins | Acid proteases | Acid proteases | Pepsin-like | beta-secretase (memapsin) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
B | d4fslb_ | All beta proteins | Acid proteases | Acid proteases | Pepsin-like | beta-secretase (memapsin) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth E] | d4fsle_ | All beta proteins | Acid proteases | Acid proteases | Pepsin-like | beta-secretase (memapsin) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
C [auth D] | d4fsld_ | All beta proteins | Acid proteases | Acid proteases | Pepsin-like | beta-secretase (memapsin) | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A | SCOP2B Superfamily | Acid proteases | 8036280 | 3001059 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | Acid proteases | 8036280 | 3001059 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Acid proteases | 8036280 | 3001059 | SCOP2B (2022-06-29) |
C [auth D] | SCOP2B Superfamily | Acid proteases | 8036280 | 3001059 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | Asp_C_1 | e4fslA2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_C_1 | ECOD (1.6) |
A | Asp_N | e4fslA3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_N | ECOD (1.6) |
B | Asp_C_1 | e4fslB2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_C_1 | ECOD (1.6) |
B | Asp_N | e4fslB3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_N | ECOD (1.6) |
D [auth E] | Asp_C_1 | e4fslE2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_C_1 | ECOD (1.6) |
D [auth E] | Asp_N | e4fslE3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_N | ECOD (1.6) |
C [auth D] | Asp_C_1 | e4fslD2 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_C_1 | ECOD (1.6) |
C [auth D] | Asp_N | e4fslD3 | A: beta barrels | X: cradle loop barrel | H: RIFT-related | T: acid protease | F: Asp_N | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.40.70.10 | Mainly Beta | Beta Barrel | Cathepsin D, subunit A | domain 1 | CATH (4.3.0) |
B | 2.40.70.10 | Mainly Beta | Beta Barrel | Cathepsin D, subunit A | domain 1 | CATH (4.3.0) |
D [auth E] | 2.40.70.10 | Mainly Beta | Beta Barrel | Cathepsin D, subunit A | domain 1 | CATH (4.3.0) |
C [auth D] | 2.40.70.10 | Mainly Beta | Beta Barrel | Cathepsin D, subunit A | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, B, C [auth D], D [auth E] | PF00026 | Eukaryotic aspartyl protease (Asp) | Eukaryotic aspartyl protease | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A, B, C [auth D], D [auth E] | IPR009120 | Beta-secretase BACE1 | Family |
A, B, C [auth D], D [auth E] | IPR033121 | Peptidase family A1 domain | Domain |
A, B, C [auth D], D [auth E] | IPR033874 | Memapsin-like | Domain |
A, B, C [auth D], D [auth E] | IPR001461 | Aspartic peptidase A1 | Family |
A, B, C [auth D], D [auth E] | IPR009119 | Beta-secretase BACE | Family |
A, B, C [auth D], D [auth E] | IPR021109 | Aspartic peptidase domain superfamily | Homologous Superfamily |
A, B, C [auth D], D [auth E] | IPR001969 | Aspartic peptidase, active site | Active Site |