4JNG
Schmallenberg virus nucleoprotein-RNA complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth A] | SCOP2B Superfamily | PepMV Coat protein-like | 8089910 | 3002401 | SCOP2B (2022-06-29) |
C [auth B] | SCOP2B Superfamily | PepMV Coat protein-like | 8089910 | 3002401 | SCOP2B (2022-06-29) |
D [auth C] | SCOP2B Superfamily | PepMV Coat protein-like | 8089910 | 3002401 | SCOP2B (2022-06-29) |
E [auth D] | SCOP2 Family | BUNV nucleocapsid protein-like | 8048494 | 4006117 | SCOP2 (2022-06-29) |
E [auth D] | SCOP2 Superfamily | PepMV Coat protein-like | 8089910 | 3002401 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B [auth A] | Bunya_nucleocap | e4jngA1 | A: alpha complex topology | X: Leanyer virus nucleoprotein-related (From Topology) | H: Leanyer virus nucleoprotein-related (From Topology) | T: Leanyer virus nucleoprotein-related | F: Bunya_nucleocap | ECOD (1.6) |
C [auth B] | Bunya_nucleocap | e4jngB1 | A: alpha complex topology | X: Leanyer virus nucleoprotein-related (From Topology) | H: Leanyer virus nucleoprotein-related (From Topology) | T: Leanyer virus nucleoprotein-related | F: Bunya_nucleocap | ECOD (1.6) |
D [auth C] | Bunya_nucleocap | e4jngC1 | A: alpha complex topology | X: Leanyer virus nucleoprotein-related (From Topology) | H: Leanyer virus nucleoprotein-related (From Topology) | T: Leanyer virus nucleoprotein-related | F: Bunya_nucleocap | ECOD (1.6) |
E [auth D] | Bunya_nucleocap | e4jngD1 | A: alpha complex topology | X: Leanyer virus nucleoprotein-related (From Topology) | H: Leanyer virus nucleoprotein-related (From Topology) | T: Leanyer virus nucleoprotein-related | F: Bunya_nucleocap | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth A] | 1.20.142.20 | Mainly Alpha | Up-down Bundle | Poly(ADP-ribose) Polymerase | domain 1 | CATH (4.3.0) |
B [auth A] | 1.10.472.180 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
C [auth B] | 1.20.142.20 | Mainly Alpha | Up-down Bundle | Poly(ADP-ribose) Polymerase | domain 1 | CATH (4.3.0) |
C [auth B] | 1.10.472.180 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
D [auth C] | 1.20.142.20 | Mainly Alpha | Up-down Bundle | Poly(ADP-ribose) Polymerase | domain 1 | CATH (4.3.0) |
D [auth C] | 1.10.472.180 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
E [auth D] | 1.20.142.20 | Mainly Alpha | Up-down Bundle | Poly(ADP-ribose) Polymerase | domain 1 | CATH (4.3.0) |
E [auth D] | 1.10.472.180 | Mainly Alpha | Orthogonal Bundle | Cyclin A | domain 1 | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth A], C [auth B], D [auth C], E [auth D] | PF00952 | Bunyavirus nucleocapsid (N) protein (Bunya_nucleocap) | Bunyavirus nucleocapsid (N) protein | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A [auth L] | RNA (42-MER) | - | - | - |
B [auth A], C [auth B], D [auth C], E [auth D] | Nucleocapsid protein | - |
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
B [auth A], C [auth B], D [auth C], E [auth D] | IPR043011 | Bunyavirus nucleocapsid (N) , C-terminal domain | Homologous Superfamily |
B [auth A], C [auth B], D [auth C], E [auth D] | IPR043012 | Bunyavirus nucleocapsid (N) , N-terminal domain | Homologous Superfamily |
B [auth A], C [auth B], D [auth C], E [auth D] | IPR001784 | Bunyavirus nucleocapsid (N) protein | Family |