Structure of a single-domain camelid antibody fragment cAb-H7S specific of the BlaP beta-lactamase from Bacillus licheniformis
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | d4m3ja1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Lama glama ) [TaxId: 9844 ], | SCOPe (2.08) |
| A | d4m3ja2 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Lama glama ) [TaxId: 9844 ], | SCOPe (2.08) |
| B | d4m3jb1 | All beta proteins | Immunoglobulin-like beta-sandwich | Immunoglobulin | V set domains (antibody variable domain-like) | automated matches | (Lama glama ) [TaxId: 9844 ], | SCOPe (2.08) |
| B | d4m3jb3 | Artifacts | Tags | Tags | Tags | C-terminal Tags | (Lama glama ) [TaxId: 9844 ], | SCOPe (2.08) |
| B | d4m3jb2 | Artifacts | Tags | Tags | Tags | N-terminal Tags | (Lama glama ) [TaxId: 9844 ], | SCOPe (2.08) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | e4m3jA1 | A: a/b three-layered sandwiches | X: avirulence protein AvrPiz-t homologs | H: avirulence protein AvrPiz-t homologs | T: avirulence protein AvrPiz-t homologs | F: | ECOD (v294.1) | |
| B | e4m3jB1 | A: a/b three-layered sandwiches | X: avirulence protein AvrPiz-t homologs | H: avirulence protein AvrPiz-t homologs | T: avirulence protein AvrPiz-t homologs | F: | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
| B | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
IMGT Antibody Annotation IMGT Database Homepage
| Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
|---|---|---|---|---|---|---|---|---|
| VHH cAb-H7S | VH | Lama glama (llama) | IGHV3S3*01, IGHJ4*01 | V-DOMAIN VH | IG | (VH) | IMGT (202611-0) |
