4ORO | pdb_00004oro

Structure of Influenza B PB2 cap-binding domain complex with GDP

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
Dd4orod1 Alpha and beta proteins (a+b) Influenza virus PB2 cap binding domain-like Influenza virus PB2 cap binding domain-like automated matches automated matches (Influenza B virus ) [TaxId: 11520 ], SCOPe (2.08)
Dd4orod2 Artifacts Tags Tags Tags N-terminal Tags (Influenza B virus ) [TaxId: 11520 ], SCOPe (2.08)
Cd4oroc1 Alpha and beta proteins (a+b) Influenza virus PB2 cap binding domain-like Influenza virus PB2 cap binding domain-like automated matches automated matches (Influenza B virus ) [TaxId: 11520 ], SCOPe (2.08)
Cd4oroc2 Artifacts Tags Tags Tags N-terminal Tags (Influenza B virus ) [TaxId: 11520 ], SCOPe (2.08)
Bd4orob1 Alpha and beta proteins (a+b) Influenza virus PB2 cap binding domain-like Influenza virus PB2 cap binding domain-like automated matches automated matches (Influenza B virus ) [TaxId: 11520 ], SCOPe (2.08)
Bd4orob2 Artifacts Tags Tags Tags N-terminal Tags (Influenza B virus ) [TaxId: 11520 ], SCOPe (2.08)
Ad4oroa1 Alpha and beta proteins (a+b) Influenza virus PB2 cap binding domain-like Influenza virus PB2 cap binding domain-like automated matches automated matches (Influenza B virus ) [TaxId: 11520 ], SCOPe (2.08)
Ad4oroa2 Artifacts Tags Tags Tags N-terminal Tags (Influenza B virus ) [TaxId: 11520 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DWD40e4oroD1 A: a/b three-layered sandwichesX: OB-foldH: Phage tail fiber protein trimerization domainT: 7-bladedF: WD40ECOD (v294.1)
CWD40e4oroC1 A: a/b three-layered sandwichesX: OB-foldH: Phage tail fiber protein trimerization domainT: 7-bladedF: WD40ECOD (v294.1)
BWD40e4oroB1 A: a/b three-layered sandwichesX: OB-foldH: Phage tail fiber protein trimerization domainT: 7-bladedF: WD40ECOD (v294.1)
AWD40e4oroA1 A: a/b three-layered sandwichesX: OB-foldH: Phage tail fiber protein trimerization domainT: 7-bladedF: WD40ECOD (v294.1)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Polymerase PB2- -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR048298Influenza RNA polymerase PB2, CAP binding domainDomain