4OV6
Crystal structure of PCSK9(53-451) with Adnectin
External Resource: Annotation
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | d4ov6b_ | Alpha and beta proteins (a/b) | Subtilisin-like | Subtilisin-like | Subtilases | Proprotein convertase subtilisin/kexin type 9 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
D [auth E] | d4ov6e_ | Alpha and beta proteins (a/b) | Subtilisin-like | Subtilisin-like | Subtilases | Proprotein convertase subtilisin/kexin type 9 | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
E [auth F] | d4ov6f_ | All beta proteins | Immunoglobulin-like beta-sandwich | Fibronectin type III | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
F [auth G] | d4ov6g_ | All beta proteins | Immunoglobulin-like beta-sandwich | Fibronectin type III | automated matches | automated matches | human (Homo sapiens ) [TaxId: 9606 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | Subtilisin-like | 8069727 | 3000226 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2 Family | Subtilases | 8069726 | 4000409 | SCOP2 (2022-06-29) |
D [auth E] | SCOP2 Superfamily | Subtilisin-like | 8069727 | 3000226 | SCOP2 (2022-06-29) |
E [auth F] | SCOP2 Family | Fibronectin type III | 8070859 | 4007555 | SCOP2 (2022-06-29) |
E [auth F] | SCOP2 Superfamily | Fibronectin type III | 8070860 | 3002063 | SCOP2 (2022-06-29) |
F [auth G] | SCOP2B Superfamily | Fibronectin type III | 8070860 | 3002063 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
B | Peptidase_S8 | e4ov6B1 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Subtilisin-like (From Topology) | T: Subtilisin-like | F: Peptidase_S8 | ECOD (1.6) |
D [auth E] | Peptidase_S8 | e4ov6E1 | A: a/b three-layered sandwiches | X: Subtilisin-like | H: Subtilisin-like (From Topology) | T: Subtilisin-like | F: Peptidase_S8 | ECOD (1.6) |
A | Inhibitor_I9 | e4ov6A1 | A: a+b two layers | X: Alpha-beta plaits | H: Protease propeptides/inhibitors (From Topology) | T: Protease propeptides/inhibitors | F: Inhibitor_I9 | ECOD (1.6) |
C [auth D] | Inhibitor_I9 | e4ov6D1 | A: a+b two layers | X: Alpha-beta plaits | H: Protease propeptides/inhibitors (From Topology) | T: Protease propeptides/inhibitors | F: Inhibitor_I9 | ECOD (1.6) |
E [auth F] | fn3 | e4ov6F1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3 | ECOD (1.6) |
F [auth G] | fn3 | e4ov6G1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: fn3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B | 3.40.50.200 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Peptidase S8/S53 domain | CATH (4.3.0) |
D [auth E] | 3.40.50.200 | Alpha Beta | 3-Layer(aba) Sandwich | Rossmann fold | Peptidase S8/S53 domain | CATH (4.3.0) |
A | 3.30.70.80 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Peptidase S8 propeptide/proteinase inhibitor I9 | CATH (4.3.0) |
C [auth D] | 3.30.70.80 | Alpha Beta | 2-Layer Sandwich | Alpha-Beta Plaits | Peptidase S8 propeptide/proteinase inhibitor I9 | CATH (4.3.0) |
E [auth F] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
F [auth G] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A, C [auth D] | PF05922 | Peptidase inhibitor I9 (Inhibitor_I9) | Peptidase inhibitor I9 | This family includes the proteinase B inhibitor from Saccharomyces cerevisiae and the activation peptides from peptidases of the subtilisin family. The subtilisin propeptides are known to function as molecular chaperones, assisting in the folding of ... | Domain |
E [auth F], F [auth G] | PF00041 | Fibronectin type III domain (fn3) | Fibronectin type III domain | - | Domain |