4PON | pdb_00004pon

The crystal structure of a putative SAM-dependent methyltransferase, YtqB, from Bacillus subtilis

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyS-adenosyl-L-methionine-dependent methyltransferases 8090812 3000118 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyS-adenosyl-L-methionine-dependent methyltransferases 8090812 3000118 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BPDH_Ce4ponB1 A: alpha bundlesX: DEATH domainH: 6-phosphogluconate dehydrogenase C-terminal domain-likeT: 6-phosphogluconate dehydrogenase C-terminal domain-likeF: PDH_CECOD (develop294)
ARibosomal_L35pe4ponA1 A: alpha bundlesX: DEATH domainH: HTHT: winged helix domainF: Ribosomal_L35pECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.40.50.150 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Vaccinia Virus protein VP39CATH (4.3.0)
A3.40.50.150 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold Vaccinia Virus protein VP39CATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Putative RNA methylase -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR029063S-adenosyl-L-methionine-dependent methyltransferase superfamilyHomologous Superfamily
A, B
IPR010719Methyltransferase MnmM-likeFamily