4PYD | pdb_00004pyd

MoaC in complex with cPMP crystallized in space group P212121

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
E	d4pyde_	Alpha and beta proteins (a+b)	Ferredoxin-like	Molybdenum cofactor biosynthesis protein C, MoaC	automated matches	automated matches	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
D	d4pydd_	Alpha and beta proteins (a+b)	Ferredoxin-like	Molybdenum cofactor biosynthesis protein C, MoaC	automated matches	automated matches	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
C	d4pydc_	Alpha and beta proteins (a+b)	Ferredoxin-like	Molybdenum cofactor biosynthesis protein C, MoaC	automated matches	automated matches	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
B	d4pydb_	Alpha and beta proteins (a+b)	Ferredoxin-like	Molybdenum cofactor biosynthesis protein C, MoaC	automated matches	automated matches	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)
A	d4pyda_	Alpha and beta proteins (a+b)	Ferredoxin-like	Molybdenum cofactor biosynthesis protein C, MoaC	automated matches	automated matches	(Escherichia coli K-12 ) [TaxId: 83333 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
F	SCOP2B Superfamily	Molybdenum cofactor biosynthesis protein C, MoaC	8035535	3001204	SCOP2B (2022-06-29)
E	SCOP2B Superfamily	Molybdenum cofactor biosynthesis protein C, MoaC	8035535	3001204	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Molybdenum cofactor biosynthesis protein C, MoaC	8035535	3001204	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Molybdenum cofactor biosynthesis protein C, MoaC	8035535	3001204	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Molybdenum cofactor biosynthesis protein C, MoaC	8035535	3001204	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Molybdenum cofactor biosynthesis protein C, MoaC	8035535	3001204	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
F	Fe_bilin_red	e4pydF1	A: alpha bundles	X: HTH	H: HTH	T: Three-helical HTH	F: Fe_bilin_red	ECOD (develop294)
E	Fe_bilin_red	e4pydE1	A: alpha bundles	X: HTH	H: HTH	T: Three-helical HTH	F: Fe_bilin_red	ECOD (develop294)
D	Fe_bilin_red	e4pydD1	A: alpha bundles	X: HTH	H: HTH	T: Three-helical HTH	F: Fe_bilin_red	ECOD (develop294)
C	Fe_bilin_red	e4pydC1	A: alpha bundles	X: HTH	H: HTH	T: Three-helical HTH	F: Fe_bilin_red	ECOD (develop294)
B	Fe_bilin_red	e4pydB1	A: alpha bundles	X: HTH	H: HTH	T: Three-helical HTH	F: Fe_bilin_red	ECOD (develop294)
A	Fe_bilin_red	e4pydA1	A: alpha bundles	X: HTH	H: HTH	T: Three-helical HTH	F: Fe_bilin_red	ECOD (develop294)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
F	3.30.70.640	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Molybdopterin cofactor biosynthesis C (MoaC) domain	CATH (4.3.0)
E	3.30.70.640	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Molybdopterin cofactor biosynthesis C (MoaC) domain	CATH (4.3.0)
D	3.30.70.640	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Molybdopterin cofactor biosynthesis C (MoaC) domain	CATH (4.3.0)
C	3.30.70.640	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Molybdopterin cofactor biosynthesis C (MoaC) domain	CATH (4.3.0)
B	3.30.70.640	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Molybdopterin cofactor biosynthesis C (MoaC) domain	CATH (4.3.0)
A	3.30.70.640	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits	Molybdopterin cofactor biosynthesis C (MoaC) domain	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D, E A, B, C, D, E, F	PF01967	MoaC family (MoaC)	MoaC family	Members of this family are involved in molybdenum cofactor biosynthesis. However their molecular function is not known.	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C, D, E A, B, C, D, E, F	Molybdenum cofactor biosynthesis protein MoaC	phosphorus-oxygen lyase activity lyase activity catalytic activity cyclic pyranopterin monophosphate synthase activity identical protein binding protein binding binding	Mo-molybdopterin cofactor biosynthetic process Mo-molybdopterin cofactor metabolic process primary metabolic process prosthetic group metabolic process molybdopterin cofactor biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process molybdopterin cofactor metabolic process phosphate-containing compound metabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process Mo-molybdopterin cofactor biosynthetic process Mo-molybdopterin cofactor metabolic process primary metabolic process prosthetic group metabolic process molybdopterin cofactor biosynthetic process biosynthetic process organophosphate metabolic process organophosphate biosynthetic process molybdopterin cofactor metabolic process phosphate-containing compound metabolic process metabolic process cellular process protein metabolic process macromolecule metabolic process phosphorus metabolic process	protein-containing complex

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D, E A, B, C, D, E, F	IPR023045	Molybdenum cofactor biosynthesis C	Family
A, B, C, D, E A, B, C, D, E, F	IPR002820	Molybdopterin cofactor biosynthesis C (MoaC) domain	Domain
A, B, C, D, E A, B, C, D, E, F	IPR050105	Molybdenum cofactor biosynthesis MoaA/MoaC	Family
A, B, C, D, E A, B, C, D, E, F	IPR047594	Molybdenum cofactor biosynthesis C, bacteria/eukaryotes	Family
A, B, C, D, E A, B, C, D, E, F	IPR036522	Molybdopterin cofactor biosynthesis C (MoaC) domain superfamily	Homologous Superfamily

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.