Structure of the carboxy-terminal domain of the bacteriophage T5 L- shaped tail fiber with its intra-molecular chaperone domain


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
IMolybdopterine4uw8I1 A: alpha arraysX: jelly-rollH: Double-stranded beta-helixT: Double-stranded beta-helixF: MolybdopterinECOD (v295.2)
HMolybdopterine4uw8H1 A: alpha arraysX: jelly-rollH: Double-stranded beta-helixT: Double-stranded beta-helixF: MolybdopterinECOD (v295.2)
GMolybdopterine4uw8G1 A: alpha arraysX: jelly-rollH: Double-stranded beta-helixT: Double-stranded beta-helixF: MolybdopterinECOD (v295.2)
FMolybdopterine4uw8F1 A: alpha arraysX: jelly-rollH: Double-stranded beta-helixT: Double-stranded beta-helixF: MolybdopterinECOD (v295.2)
EMolybdopterine4uw8E1 A: alpha arraysX: jelly-rollH: Double-stranded beta-helixT: Double-stranded beta-helixF: MolybdopterinECOD (v295.2)
DMolybdopterine4uw8D1 A: alpha arraysX: jelly-rollH: Double-stranded beta-helixT: Double-stranded beta-helixF: MolybdopterinECOD (v295.2)
Ce4uw8C1 A: alpha arraysX: Repetitive alpha hairpinsH: C2 domainT: C2 domainF:ECOD (v295.2)
Be4uw8B1 A: alpha arraysX: Repetitive alpha hairpinsH: C2 domainT: C2 domainF:ECOD (v295.2)
Ae4uw8A1 A: alpha arraysX: Repetitive alpha hairpinsH: C2 domainT: C2 domainF:ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF13884Chaperone of endosialidase (Peptidase_S74)Chaperone of endosialidaseThis is the very C-terminal, chaperone, domain of the bacteriophage protein endosialidase. It releases itself, via the serine-lysine dyad at the N-terminus, from the remainder of the end-tail-spike. Cleavage occurs after the threonine which is the fi ...This is the very C-terminal, chaperone, domain of the bacteriophage protein endosialidase. It releases itself, via the serine-lysine dyad at the N-terminus, from the remainder of the end-tail-spike. Cleavage occurs after the threonine which is the final residue of the End-tail-spike family, Pfam:PF12219. The endosialidase protein forms homotrimeric molecules in bacteriophages [1]. The catalytic dyad allows this portion of the molecule to be cleaved from the more N-terminal region such that the latter can fold and bind to polysialic acid in the bacterial outer envelope [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR036388Winged helix-like DNA-binding domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR030392Intramolecular chaperone auto-processing domainDomain