4V4P | pdb_00004v4p

Crystal structure of 70S ribosome with thrS operator and tRNAs.


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
EB [auth BW]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
DB [auth BV]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
CB [auth BU]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
BB [auth BT]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
AB [auth BS]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
YA [auth BQ]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
XA [auth BP]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
WA [auth BO]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
VA [auth BN]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
UA [auth BM]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
TA [auth BL]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
RA [auth BJ]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
PA [auth BH]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
PA [auth BH]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
OA [auth BG]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
NA [auth BF]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
NA [auth BF]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
MA [auth BE]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
C [auth AC]SCOP2B SuperfamilyRibosomal protein L1p/L10e-like 8037625 3001911 SCOP2B (2022-06-29)
Y [auth A0]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
S [auth AS]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth AJ]Adeno_Penton_Be4v4pAJ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
I [auth AI]Adeno_Penton_Be4v4pAI1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
H [auth AH]Adeno_Penton_Be4v4pAH1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
G [auth AG]Adeno_Penton_Be4v4pAG1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
F [auth AF]Adeno_Penton_Be4v4pAF1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
EB [auth BW]Adeno_Penton_Be4v4pBW1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
DB [auth BV]Cellulasee4v4pBV1 A: alpha bundlesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (develop294)
CB [auth BU]Adeno_Penton_Be4v4pBU1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
BB [auth BT]Ribosomal_S17,Ribosomal_S17_Ne4v4pBT1 A: alpha bundlesX: OB-foldH: Nucleic acid-binding proteinT: Nucleic acid-binding proteinF: Ribosomal_S17,Ribosomal_S17_NECOD (develop294)
AB [auth BS]Adeno_Penton_Be4v4pBS1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
ZA [auth BR]Adeno_Penton_Be4v4pBR1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
E [auth AE]Adeno_Penton_Be4v4pAE1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
YA [auth BQ]Adeno_Penton_Be4v4pBQ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
XA [auth BP]Cellulasee4v4pBP1 A: alpha bundlesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (develop294)
WA [auth BO]Adeno_Penton_Be4v4pBO1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
VA [auth BN]Adeno_Penton_Be4v4pBN1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
UA [auth BM]Adeno_Penton_Be4v4pBM1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
TA [auth BL]FlaF_Ig-likee4v4pBL1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (develop294)
SA [auth BK]Adeno_Penton_Be4v4pBK1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
RA [auth BJ]Adeno_Penton_Be4v4pBJ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
QA [auth BI]Adeno_Penton_Be4v4pBI1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
PA [auth BH]Adeno_Penton_Be4v4pBH1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
D [auth AD]ArsA_ATPase, ParAe4v4pAD1 A: alpha bundlesX: Anticodon-binding domain of Class II aaRSH: Anticodon-binding domain of Class II aaRST: Anticodon-binding domain of Class II aaRSF: ArsA_ATPase, ParAECOD (develop294)
OA [auth BG]Cellulasee4v4pBG1 A: alpha bundlesX: HAD domain-likeH: HAD domain-relatedT: PIN domain-likeF: CellulaseECOD (develop294)
NA [auth BF]Adeno_Penton_Be4v4pBF1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
MA [auth BE]FlaF_Ig-likee4v4pBE1 A: alpha bundlesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: FlaF_Ig-likeECOD (develop294)
HA [auth A9]Adeno_Penton_Be4v4pA91 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
GA [auth A8]Adeno_Penton_Be4v4pA81 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
FA [auth A7]Adeno_Penton_Be4v4pA71 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
EA [auth A6]PemK_toxine4v4pA61 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
C [auth AC]Adeno_Penton_Be4v4pAC1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
DA [auth A5]Adeno_Penton_Be4v4pA51 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
CA [auth A4]Adeno_Penton_Be4v4pA41 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
BA [auth A3]Adeno_Penton_Be4v4pA31 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
AA [auth A2]Adeno_Penton_Be4v4pA21 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
Z [auth A1]Adeno_Penton_Be4v4pA11 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
Y [auth A0]Adeno_Penton_Be4v4pA01 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
X [auth AX]Adeno_Penton_Be4v4pAX1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
W [auth AW]Adeno_Penton_Be4v4pAW1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
V [auth AV]VipB_2e4v4pAV1 A: alpha bundlesX: Rossmann-likeH: Rossmann-relatedT: DHS-like NAD/FAD-binding domainF: VipB_2ECOD (develop294)
U [auth AU]Adeno_Penton_Be4v4pAU1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
T [auth AT]Adeno_Penton_Be4v4pAT1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
S [auth AS]Adeno_Penton_Be4v4pAS1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
R [auth AR]Adeno_Penton_Be4v4pAR1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
Q [auth AQ]Adeno_Penton_Be4v4pAQ1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
P [auth AP]PemK_toxine4v4pAP1 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
O [auth AO]Adeno_Penton_Be4v4pAO1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
N [auth AN]Adeno_Penton_Be4v4pAN1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
M [auth AM]Adeno_Penton_Be4v4pAM1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
L [auth AL]Adeno_Penton_Be4v4pAL1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)
K [auth AK]Adeno_Penton_Be4v4pAK1 A: alpha bundlesX: Type III secretion system domain-likeH: Antibiotic binding domain of TipA-like multidrug resistance regulatorsT: Antibiotic binding domain of TipA-like multidrug resistance regulatorsF: Adeno_Penton_BECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
DB [auth BV]PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
CB [auth BU]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
BB [auth BT]PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
AB [auth BS]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
ZA [auth BR]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
YA [auth BQ]PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
XA [auth BP]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
WA [auth BO]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
VA [auth BN]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
UA [auth BM]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
TA [auth BL]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
SA [auth BK]PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
RA [auth BJ]PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
QA [auth BI]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
PA [auth BH]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
PA [auth BH]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
D [auth AD]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
D [auth AD]PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
OA [auth BG]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
OA [auth BG]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
NA [auth BF]PF07650KH domain (KH_2)KH domainDomain
NA [auth BF]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
MA [auth BE]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
Y [auth A0]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
X [auth AX]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
S [auth AS]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth AI],
J [auth AJ]
50S ribosomal protein L7/L12---
H [auth AH]50S ribosomal protein L6---
G [auth AG]50S ribosomal protein L5---
F [auth AF]50S ribosomal protein L4---
FB [auth BX]30S ribosomal protein Thx -
EB [auth BW]30S ribosomal protein S20
DB [auth BV]30S ribosomal protein S19
CB [auth BU]30S ribosomal protein S18
BB [auth BT]30S ribosomal protein S17
AB [auth BS]30S ribosomal protein S16
ZA [auth BR]30S ribosomal protein S15
E [auth AE]50S ribosomal protein L3---
YA [auth BQ]30S ribosomal protein S14
XA [auth BP]30S ribosomal protein S13
WA [auth BO]30S ribosomal protein S12
VA [auth BN]30S ribosomal protein S11
UA [auth BM]30S ribosomal protein S10
TA [auth BL]30S ribosomal protein S9
SA [auth BK]30S ribosomal protein S8
RA [auth BJ]30S ribosomal protein S7
QA [auth BI]30S ribosomal protein S6
PA [auth BH]30S ribosomal protein S5
D [auth AD]50S ribosomal protein L2
OA [auth BG]30S ribosomal protein S4
NA [auth BF]30S ribosomal protein S3
MA [auth BE]30S ribosomal protein S2
LA [auth B1]thrS mRNA operator---
JA [auth BB],
KA [auth BC]
tRNA Phe (unmodified bases)---
IA [auth BA]16S rRNA---
HA [auth A9]50S ribosomal protein L36---
GA [auth A8]50S ribosomal protein L35---
FA [auth A7]50S ribosomal protein L34---
EA [auth A6]50S ribosomal protein L33---
C [auth AC]50S ribosomal protein L1
DA [auth A5]50S ribosomal protein L32---
CA [auth A4]50S ribosomal protein L31---
BA [auth A3]50S ribosomal protein L27---
AA [auth A2]50S ribosomal protein L21---
Z [auth A1]50S ribosomal protein L20---
Y [auth A0]50S ribosomal protein L17
X [auth AX]50S ribosomal protein L30
W [auth AW]50S ribosomal protein L29---
V [auth AV]50S general stress protein CTC (L25)---
U [auth AU]50S ribosomal protein L24---
B [auth AA]23S ribosomal RNA---
T [auth AT]50S ribosomal protein L23---
S [auth AS]50S ribosomal protein L22
R [auth AR]50S ribosomal protein L19---
Q [auth AQ]50S ribosomal protein L18---
P [auth AP]50S ribosomal protein L16---
O [auth AO]50S ribosomal protein L15---
N [auth AN]50S ribosomal protein L14---
M [auth AM]50S ribosomal protein L13---
L [auth AL]50S ribosomal protein L11---
K [auth AK]50S ribosomal protein L9---
A [auth AB]5S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
FB [auth BX]IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
FB [auth BX]IPR031414Small ribosomal subunit protein bTHXFamily
EB [auth BW]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
EB [auth BW]IPR002583Small ribosomal subunit protein bS20Family
DB [auth BV]IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
DB [auth BV]IPR002222Small ribosomal subunit protein uS19Family
DB [auth BV]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
DB [auth BV]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
CB [auth BU]IPR001648Small ribosomal subunit protein bS18Family
CB [auth BU]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
CB [auth BU]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
BB [auth BT]IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
BB [auth BT]IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
BB [auth BT]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
BB [auth BT]IPR000266Small ribosomal subunit protein uS17Family
AB [auth BS]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
AB [auth BS]IPR000307Small ribosomal subunit protein bS16Family
ZA [auth BR]IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
ZA [auth BR]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
ZA [auth BR]IPR000589Small ribosomal subunit protein uS15Family
YA [auth BQ]IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
YA [auth BQ]IPR001209Small ribosomal subunit protein uS14Family
YA [auth BQ]IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
YA [auth BQ]IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
XA [auth BP]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
XA [auth BP]IPR001892Small ribosomal subunit protein uS13Family
XA [auth BP]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
XA [auth BP]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
XA [auth BP]IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
WA [auth BO]IPR006032Small ribosomal subunit protein uS12Family
WA [auth BO]IPR005679Ribosomal protein uS12, bacteriaFamily
WA [auth BO]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
VA [auth BN]IPR001971Small ribosomal subunit protein uS11Family
VA [auth BN]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
VA [auth BN]IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
VA [auth BN]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
UA [auth BM]IPR001848Small ribosomal subunit protein uS10Family
UA [auth BM]IPR027486Small ribosomal subunit protein uS10 domainDomain
UA [auth BM]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
UA [auth BM]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
TA [auth BL]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
TA [auth BL]IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
TA [auth BL]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
TA [auth BL]IPR000754Small ribosomal subunit protein uS9Family
TA [auth BL]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
SA [auth BK]IPR000630Small ribosomal subunit protein uS8Family
SA [auth BK]IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
SA [auth BK]IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
RA [auth BJ]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
RA [auth BJ]IPR000235Small ribosomal subunit protein uS7Family
RA [auth BJ]IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
RA [auth BJ]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
RA [auth BJ]IPR023798Small ribosomal subunit protein uS7 domainDomain
QA [auth BI]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
QA [auth BI]IPR000529Small ribosomal subunit protein bS6Family
QA [auth BI]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
QA [auth BI]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
QA [auth BI]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
PA [auth BH]IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
PA [auth BH]IPR000851Small ribosomal subunit protein uS5Family
PA [auth BH]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
PA [auth BH]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
PA [auth BH]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
PA [auth BH]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
PA [auth BH]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
D [auth AD]IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
D [auth AD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
D [auth AD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
D [auth AD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
D [auth AD]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
D [auth AD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
D [auth AD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
D [auth AD]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
D [auth AD]IPR002171Large ribosomal subunit protein uL2Family
OA [auth BG]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
OA [auth BG]IPR002942RNA-binding S4 domainDomain
OA [auth BG]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
OA [auth BG]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
OA [auth BG]IPR022801Small ribosomal subunit protein uS4Family
OA [auth BG]IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
NA [auth BF]IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
NA [auth BF]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
NA [auth BF]IPR057258Small ribosomal subunit protein uS3Family
NA [auth BF]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
NA [auth BF]IPR004087K Homology domainDomain
NA [auth BF]IPR004044K Homology domain, type 2Domain
NA [auth BF]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
NA [auth BF]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
NA [auth BF]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
MA [auth BE]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
MA [auth BE]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
MA [auth BE]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
MA [auth BE]IPR001865Small ribosomal subunit protein uS2Family
C [auth AC]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
C [auth AC]IPR005878Large ribosomal subunit protein uL1, bacteriaFamily
C [auth AC]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
C [auth AC]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
C [auth AC]IPR002143Large ribosomal subunit protein uL1Family
C [auth AC]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
Y [auth A0]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
Y [auth A0]IPR000456Large ribosomal subunit protein bL17Family
X [auth AX]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
X [auth AX]IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
X [auth AX]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
X [auth AX]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
S [auth AS]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
S [auth AS]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
S [auth AS]IPR001063Large ribosomal subunit protein uL22Family
S [auth AS]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
S [auth AS]IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily