4V8C

Crystal structure analysis of ribosomal decoding (near-cognate tRNA-leu complex with paromomycin).


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
J [auth AN]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
NA [auth BN]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
K [auth AO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
OA [auth BO]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
L [auth AP]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
PA [auth BP]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
M [auth A0]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
QA [auth B0]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
N [auth AQ]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
RA [auth BQ]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
O [auth AR]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
SA [auth BR]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
P [auth A1]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
TA [auth B1]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
Q [auth A2]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
UA [auth B2]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
R [auth AS]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
VA [auth BS]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
S [auth AT]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
WA [auth BT]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
T [auth AU]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
XA [auth BU]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
V [auth A3]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
ZA [auth B3]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
AB [auth BZ]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
W [auth AZ]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
BB [auth BW]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
X [auth AW]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
DB [auth B4]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
Z [auth A4]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
AA [auth A5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
EB [auth B5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
BA [auth A6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
FB [auth B6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
C [auth AD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
C [auth AD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
GA [auth BD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
GA [auth BD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
DA [auth A8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
HB [auth B8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
IC [auth DE]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
JB [auth CE]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
JC [auth DF]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
JC [auth DF]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
KB [auth CF]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
KB [auth CF]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
KC [auth DG]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
LB [auth CG]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
LC [auth DH]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
LC [auth DH]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
MB [auth CH]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
MB [auth CH]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
NC [auth DJ]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
OB [auth CJ]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
PC [auth DL]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
QB [auth CL]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
D [auth AE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
HA [auth BE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
QC [auth DM]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
RB [auth CM]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
RC [auth DN]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
SB [auth CN]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
SC [auth DO]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
TB [auth CO]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
TC [auth DP]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
UB [auth CP]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
WC [auth DS]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
XB [auth CS]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
YC [auth DU]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
ZB [auth CU]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
AC [auth CV]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
ZC [auth DV]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
E [auth AF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
IA [auth BF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
AD [auth DW]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
BC [auth CW]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
H [auth AK]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
H [auth AK]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
LA [auth BK]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
LA [auth BK]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
I [auth AM]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
MA [auth BM]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
J [auth AN]Ribosomal_L14e4v8cAN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
NA [auth BN]Ribosomal_L14e4v8cBN1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
K [auth AO]Ribosomal_L27Ae4v8cAO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
OA [auth BO]Ribosomal_L27Ae4v8cBO1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
L [auth AP]Ribosomal_L16e4v8cAP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
PA [auth BP]Ribosomal_L16e4v8cBP1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
M [auth A0]Ribosomal_L17_1e4v8cA01 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
QA [auth B0]Ribosomal_L17_1e4v8cB01 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
N [auth AQ]Ribosomal_L18pe4v8cAQ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
RA [auth BQ]Ribosomal_L18pe4v8cBQ1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
O [auth AR]Ribosomal_L19e4v8cAR1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
SA [auth BR]Ribosomal_L19e4v8cBR1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
P [auth A1]Ribosomal_L20e4v8cA11 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
TA [auth B1]Ribosomal_L20e4v8cB11 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
Q [auth A2]Ribosomal_L21pe4v8cA21 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
UA [auth B2]Ribosomal_L21pe4v8cB21 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
R [auth AS]Ribosomal_L22e4v8cAS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
VA [auth BS]Ribosomal_L22e4v8cBS1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
S [auth AT]Ribosomal_L23_2e4v8cAT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
WA [auth BT]Ribosomal_L23_2e4v8cBT1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
T [auth AU]ribosomal_L24e4v8cAU1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
XA [auth BU]ribosomal_L24e4v8cBU1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
U [auth AV]Ribosomal_L25pe4v8cAV2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
U [auth AV]Ribosomal_TL5_Ce4v8cAV1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
YA [auth BV]Ribosomal_L25pe4v8cBV2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
YA [auth BV]Ribosomal_TL5_Ce4v8cBV1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
V [auth A3]Ribosomal_L27e4v8cA31 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
ZA [auth B3]Ribosomal_L27e4v8cB31 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
AB [auth BZ]Ribosomal_L28e4v8cBZ1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
W [auth AZ]Ribosomal_L28e4v8cAZ1 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
BB [auth BW]Ribosomal_L29e4v8cBW1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
X [auth AW]Ribosomal_L29e4v8cAW1 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
CB [auth BX]Ribosomal_L30e4v8cBX1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
Y [auth AX]Ribosomal_L30e4v8cAX1 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
DB [auth B4]Ribosomal_L31e4v8cB41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
Z [auth A4]Ribosomal_L31e4v8cA41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
AA [auth A5]Ribosomal_L32pe4v8cA51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
EB [auth B5]Ribosomal_L32pe4v8cB51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
BA [auth A6]Ribosomal_L33e4v8cA61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
FB [auth B6]Ribosomal_L33e4v8cB61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
CA [auth A7]Ribosomal_L34e4v8cA71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
GB [auth B7]Ribosomal_L34e4v8cB71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
C [auth AD]Ribosomal_L2_1e4v8cAD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
C [auth AD]Ribosomal_L2_Ce4v8cAD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
GA [auth BD]Ribosomal_L2_1e4v8cBD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
GA [auth BD]Ribosomal_L2_Ce4v8cBD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
DA [auth A8]Ribosomal_L35pe4v8cA81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
HB [auth B8]Ribosomal_L35pe4v8cB81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)
IC [auth DE]Ribosomal_S2e4v8cDE1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
JB [auth CE]Ribosomal_S2e4v8cCE1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
JC [auth DF]Ribosomal_S3_Ce4v8cDF1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
JC [auth DF]KH_2_1e4v8cDF2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
KB [auth CF]Ribosomal_S3_Ce4v8cCF2 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
KB [auth CF]KH_2_1e4v8cCF1 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
KC [auth DG]S4e4v8cDG1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
LB [auth CG]S4e4v8cCG1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
LC [auth DH]Ribosomal_S5_Ce4v8cDH2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
LC [auth DH]Ribosomal_S5e4v8cDH1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
MB [auth CH]Ribosomal_S5_Ce4v8cCH2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
MB [auth CH]Ribosomal_S5e4v8cCH1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
MC [auth DI]Ribosomal_S6e4v8cDI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
NB [auth CI]Ribosomal_S6e4v8cCI1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
NC [auth DJ]Ribosomal_S7_1e4v8cDJ1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
OB [auth CJ]Ribosomal_S7_1e4v8cCJ1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
OC [auth DK]Ribosomal_S8_Ne4v8cDK1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
OC [auth DK]Ribosomal_S8_Ce4v8cDK2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
PB [auth CK]Ribosomal_S8_Ne4v8cCK1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
PB [auth CK]Ribosomal_S8_Ce4v8cCK2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
PC [auth DL]Ribosomal_S9e4v8cDL1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
QB [auth CL]Ribosomal_S9e4v8cCL1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
D [auth AE]Ribosomal_L3e4v8cAE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
HA [auth BE]Ribosomal_L3e4v8cBE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
QC [auth DM]Ribosomal_S10e4v8cDM1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
RB [auth CM]Ribosomal_S10e4v8cCM1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
RC [auth DN]Ribosomal_S11e4v8cDN1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
SB [auth CN]Ribosomal_S11e4v8cCN1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
SC [auth DO]Ribosom_S12_S23e4v8cDO1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
TB [auth CO]Ribosom_S12_S23e4v8cCO1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
TC [auth DP]Ribosomal_S13_1e4v8cDP1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
UB [auth CP]Ribosomal_S13_1e4v8cCP1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
UC [auth DQ]Ribosomal_S14e4v8cDQ1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
VB [auth CQ]Ribosomal_S14e4v8cCQ1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
VC [auth DR]Ribosomal_S15_1e4v8cDR1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
WB [auth CR]Ribosomal_S15_1e4v8cCR1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
WC [auth DS]Ribosomal_S16_1e4v8cDS1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
XB [auth CS]Ribosomal_S16_1e4v8cCS1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
XC [auth DT]Ribosomal_S17_1e4v8cDT1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
YB [auth CT]Ribosomal_S17_1e4v8cCT1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
YC [auth DU]Ribosomal_S18e4v8cDU1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
ZB [auth CU]Ribosomal_S18e4v8cCU1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
AC [auth CV]Ribosomal_S19e4v8cCV1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
ZC [auth DV]Ribosomal_S19e4v8cDV1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
E [auth AF]Ribosomal_L4e4v8cAF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
IA [auth BF]Ribosomal_L4e4v8cBF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
AD [auth DW]Ribosomal_S20pe4v8cDW1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
BC [auth CW]Ribosomal_S20pe4v8cCW1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
F [auth AG]Ribosomal_L5_Ce4v8cAG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
JA [auth BG]Ribosomal_L5_Ce4v8cBG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
G [auth AH]Ribosomal_L6e4v8cAH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
G [auth AH]Ribosomal_L6_1e4v8cAH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
KA [auth BH]Ribosomal_L6e4v8cBH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
KA [auth BH]Ribosomal_L6_1e4v8cBH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
H [auth AK]Ribosomal_L9_Ne4v8cAK1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
H [auth AK]Ribosomal_L9_Ce4v8cAK2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
LA [auth BK]Ribosomal_L9_Ne4v8cBK1 A: a+b two layersX: L9 N-domain-likeH: L9 N-domain-like (From Topology)T: L9 N-domain-likeF: Ribosomal_L9_NECOD (1.6)
LA [auth BK]Ribosomal_L9_Ce4v8cBK2 A: a+b two layersX: Ribosomal protein L9 C-domain (From Topology)H: Ribosomal protein L9 C-domain (From Topology)T: Ribosomal protein L9 C-domainF: Ribosomal_L9_CECOD (1.6)
I [auth AM]Ribosomal_L13e4v8cAM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
MA [auth BM]Ribosomal_L13e4v8cBM1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
J [auth AN],
NA [auth BN]
PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
K [auth AO],
OA [auth BO]
PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
L [auth AP],
PA [auth BP]
PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
M [auth A0],
QA [auth B0]
PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
O [auth AR],
SA [auth BR]
PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
P [auth A1],
TA [auth B1]
PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
Q [auth A2],
UA [auth B2]
PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
R [auth AS],
VA [auth BS]
PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
S [auth AT],
WA [auth BT]
PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
T [auth AU],
XA [auth BU]
PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
T [auth AU],
XA [auth BU]
PF00467KOW motif (KOW)KOW motif- Family
U [auth AV],
YA [auth BV]
PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...Domain
U [auth AV],
YA [auth BV]
PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
AB [auth BZ],
W [auth AZ]
PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
BB [auth BW],
X [auth AW]
PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
CB [auth BX],
Y [auth AX]
PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
DB [auth B4],
Z [auth A4]
PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AA [auth A5],
EB [auth B5]
PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
CA [auth A7],
GB [auth B7]
PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
C [auth AD],
GA [auth BD]
PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
C [auth AD],
GA [auth BD]
PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domainDomain
DA [auth A8],
HB [auth B8]
PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
IC [auth DE],
JB [auth CE]
PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
JC [auth DF],
KB [auth CF]
PF07650KH domain (KH_2)KH domainDomain
JC [auth DF],
KB [auth CF]
PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
KC [auth DG],
LB [auth CG]
PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
KC [auth DG],
LB [auth CG]
PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...Domain
LC [auth DH],
MB [auth CH]
PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
LC [auth DH],
MB [auth CH]
PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
MC [auth DI],
NB [auth CI]
PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
PC [auth DL],
QB [auth CL]
PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
D [auth AE],
HA [auth BE]
PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
QC [auth DM],
RB [auth CM]
PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. Domain
RC [auth DN],
SB [auth CN]
PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
SC [auth DO],
TB [auth CO]
PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
TC [auth DP],
UB [auth CP]
PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
VC [auth DR],
WB [auth CR]
PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
WC [auth DS],
XB [auth CS]
PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
YC [auth DU],
ZB [auth CU]
PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
E [auth AF],
IA [auth BF]
PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
F [auth AG],
JA [auth BG]
PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
F [auth AG],
JA [auth BG]
PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
H [auth AK],
LA [auth BK]
PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
H [auth AK],
LA [auth BK]
PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
I [auth AM],
MA [auth BM]
PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth AA],
EA [auth BA]
RNA (2912-MER)---
J [auth AN],
NA [auth BN]
50S ribosomal protein L14
K [auth AO],
OA [auth BO]
50S ribosomal protein L15
L [auth AP],
PA [auth BP]
50S ribosomal protein L16
M [auth A0],
QA [auth B0]
50S ribosomal protein L17
N [auth AQ],
RA [auth BQ]
50S ribosomal protein L18
O [auth AR],
SA [auth BR]
50S ribosomal protein L19
P [auth A1],
TA [auth B1]
50S ribosomal protein L20
Q [auth A2],
UA [auth B2]
50S ribosomal protein L21
R [auth AS],
VA [auth BS]
50S ribosomal protein L22
S [auth AT],
WA [auth BT]
50S ribosomal protein L23
B [auth AB],
FA [auth BB]
5S RIBOSOMAL RNA---
T [auth AU],
XA [auth BU]
50S ribosomal protein L24
U [auth AV],
YA [auth BV]
50S ribosomal protein L25
V [auth A3],
ZA [auth B3]
50S ribosomal protein L27
AB [auth BZ],
W [auth AZ]
50S ribosomal protein L28
BB [auth BW],
X [auth AW]
50S ribosomal protein L29
CB [auth BX],
Y [auth AX]
50S ribosomal protein L30
DB [auth B4],
Z [auth A4]
50S ribosomal protein L31
AA [auth A5],
EB [auth B5]
50S ribosomal protein L32
BA [auth A6],
FB [auth B6]
50S ribosomal protein L33
CA [auth A7],
GB [auth B7]
50S ribosomal protein L34
C [auth AD],
GA [auth BD]
50S ribosomal protein L2
DA [auth A8],
HB [auth B8]
50S ribosomal protein L35
HC [auth DA],
IB [auth CA]
16S ribosomal RNA---
IC [auth DE],
JB [auth CE]
30S RIBOSOMAL PROTEIN S2
JC [auth DF],
KB [auth CF]
30S RIBOSOMAL PROTEIN S3
KC [auth DG],
LB [auth CG]
30S RIBOSOMAL PROTEIN S4
LC [auth DH],
MB [auth CH]
30S RIBOSOMAL PROTEIN S5
MC [auth DI],
NB [auth CI]
30S RIBOSOMAL PROTEIN S6
NC [auth DJ],
OB [auth CJ]
30S RIBOSOMAL PROTEIN S7
OC [auth DK],
PB [auth CK]
30S RIBOSOMAL PROTEIN S8---
PC [auth DL],
QB [auth CL]
30S RIBOSOMAL PROTEIN S9
D [auth AE],
HA [auth BE]
50S ribosomal protein L3
QC [auth DM],
RB [auth CM]
30S RIBOSOMAL PROTEIN S10
RC [auth DN],
SB [auth CN]
30S RIBOSOMAL PROTEIN S11
SC [auth DO],
TB [auth CO]
30S RIBOSOMAL PROTEIN S12
TC [auth DP],
UB [auth CP]
30S RIBOSOMAL PROTEIN S13
UC [auth DQ],
VB [auth CQ]
30S RIBOSOMAL PROTEIN S14---
VC [auth DR],
WB [auth CR]
30S RIBOSOMAL PROTEIN S15
WC [auth DS],
XB [auth CS]
30S RIBOSOMAL PROTEIN S16
XC [auth DT],
YB [auth CT]
30S RIBOSOMAL PROTEIN S17---
YC [auth DU],
ZB [auth CU]
30S RIBOSOMAL PROTEIN S18
AC [auth CV],
ZC [auth DV]
30S RIBOSOMAL PROTEIN S19
E [auth AF],
IA [auth BF]
50S ribosomal protein L4
AD [auth DW],
BC [auth CW]
30S RIBOSOMAL PROTEIN S20
BD [auth DX],
CC [auth CX]
30S RIBOSOMAL PROTEIN THX -
CD [auth DB],
DC [auth CB]
TRNA-LEU---
DD [auth DC],
EC [auth CC],
ED [auth DD],
FC [auth CD]
TRNA-FMET---
FD [auth D1],
GC [auth C1]
MRNA---
F [auth AG],
JA [auth BG]
50S ribosomal protein L5
G [auth AH],
KA [auth BH]
50S ribosomal protein L6---
H [auth AK],
LA [auth BK]
50S ribosomal protein L9
I [auth AM],
MA [auth BM]
50S ribosomal protein L13

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
J [auth AN],
NA [auth BN]
IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
J [auth AN],
NA [auth BN]
IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
J [auth AN],
NA [auth BN]
IPR000218Large ribosomal subunit protein uL14Family
J [auth AN],
NA [auth BN]
IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
K [auth AO],
OA [auth BO]
IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
K [auth AO],
OA [auth BO]
IPR021131Large ribosomal subunit protein uL15/eL18Domain
K [auth AO],
OA [auth BO]
IPR030878Large ribosomal subunit protein uL15Family
K [auth AO],
OA [auth BO]
IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
K [auth AO],
OA [auth BO]
IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
L [auth AP],
PA [auth BP]
IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
L [auth AP],
PA [auth BP]
IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
L [auth AP],
PA [auth BP]
IPR016180Large ribosomal subunit protein uL16 domainDomain
L [auth AP],
PA [auth BP]
IPR047873Large ribosomal subunit protein uL16Family
M [auth A0],
QA [auth B0]
IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
M [auth A0],
QA [auth B0]
IPR000456Large ribosomal subunit protein bL17Family
N [auth AQ],
RA [auth BQ]
IPR005484Large ribosomal subunit protein uL18Family
N [auth AQ],
RA [auth BQ]
IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
O [auth AR],
SA [auth BR]
IPR001857Large ribosomal subunit protein bL19Family
O [auth AR],
SA [auth BR]
IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
O [auth AR],
SA [auth BR]
IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
O [auth AR],
SA [auth BR]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
P [auth A1],
TA [auth B1]
IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
P [auth A1],
TA [auth B1]
IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
P [auth A1],
TA [auth B1]
IPR005813Large ribosomal subunit protein bL20Family
Q [auth A2],
UA [auth B2]
IPR028909Large ribosomal subunit protein bL21-likeFamily
Q [auth A2],
UA [auth B2]
IPR001787Large ribosomal subunit protein bL21Family
Q [auth A2],
UA [auth B2]
IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
R [auth AS],
VA [auth BS]
IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
R [auth AS],
VA [auth BS]
IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
R [auth AS],
VA [auth BS]
IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
R [auth AS],
VA [auth BS]
IPR001063Large ribosomal subunit protein uL22Family
R [auth AS],
VA [auth BS]
IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
S [auth AT],
WA [auth BT]
IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
S [auth AT],
WA [auth BT]
IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
S [auth AT],
WA [auth BT]
IPR013025Large ribosomal subunit protein uL23-likeFamily
T [auth AU],
XA [auth BU]
IPR003256Large ribosomal subunit protein uL24Family
T [auth AU],
XA [auth BU]
IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
T [auth AU],
XA [auth BU]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
T [auth AU],
XA [auth BU]
IPR005824KOWDomain
T [auth AU],
XA [auth BU]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
T [auth AU],
XA [auth BU]
IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
U [auth AV],
YA [auth BV]
IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
U [auth AV],
YA [auth BV]
IPR001021Ribosomal protein bL25, long-formFamily
U [auth AV],
YA [auth BV]
IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
U [auth AV],
YA [auth BV]
IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
U [auth AV],
YA [auth BV]
IPR020057Large ribosomal subunit protein bL25, beta domainDomain
U [auth AV],
YA [auth BV]
IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
U [auth AV],
YA [auth BV]
IPR050070Bacterial ribosomal protein bL25Family
V [auth A3],
ZA [auth B3]
IPR001684Large ribosomal subunit protein bL27Family
V [auth A3],
ZA [auth B3]
IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
AB [auth BZ],
W [auth AZ]
IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
AB [auth BZ],
W [auth AZ]
IPR050096Bacterial ribosomal protein bL28Family
AB [auth BZ],
W [auth AZ]
IPR026569Large ribosomal subunit protein bL28Family
AB [auth BZ],
W [auth AZ]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
BB [auth BW],
X [auth AW]
IPR050063Universal ribosomal protein uL29Family
BB [auth BW],
X [auth AW]
IPR001854Large ribosomal subunit protein uL29Family
BB [auth BW],
X [auth AW]
IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
BB [auth BW],
X [auth AW]
IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
CB [auth BX],
Y [auth AX]
IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
CB [auth BX],
Y [auth AX]
IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
CB [auth BX],
Y [auth AX]
IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
CB [auth BX],
Y [auth AX]
IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
DB [auth B4],
Z [auth A4]
IPR002150Large ribosomal subunit protein bL31 type A/BFamily
DB [auth B4],
Z [auth A4]
IPR027491Large ribosomal subunit protein bL31 type AFamily
DB [auth B4],
Z [auth A4]
IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
DB [auth B4],
Z [auth A4]
IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AA [auth A5],
EB [auth B5]
IPR002677Large ribosomal subunit protein bL32Family
AA [auth A5],
EB [auth B5]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AA [auth A5],
EB [auth B5]
IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
BA [auth A6],
FB [auth B6]
IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
BA [auth A6],
FB [auth B6]
IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
BA [auth A6],
FB [auth B6]
IPR001705Large ribosomal subunit protein bL33Family
BA [auth A6],
FB [auth B6]
IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
CA [auth A7],
GB [auth B7]
IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
CA [auth A7],
GB [auth B7]
IPR000271Large ribosomal subunit protein bL34Family
C [auth AD],
GA [auth BD]
IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
C [auth AD],
GA [auth BD]
IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
C [auth AD],
GA [auth BD]
IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
C [auth AD],
GA [auth BD]
IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
C [auth AD],
GA [auth BD]
IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
C [auth AD],
GA [auth BD]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
C [auth AD],
GA [auth BD]
IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
C [auth AD],
GA [auth BD]
IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
C [auth AD],
GA [auth BD]
IPR002171Large ribosomal subunit protein uL2Family
DA [auth A8],
HB [auth B8]
IPR021137Large ribosomal subunit protein bL35-likeFamily
DA [auth A8],
HB [auth B8]
IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
DA [auth A8],
HB [auth B8]
IPR001706Large ribosomal subunit protein bL35Family
DA [auth A8],
HB [auth B8]
IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
IC [auth DE],
JB [auth CE]
IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
IC [auth DE],
JB [auth CE]
IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
IC [auth DE],
JB [auth CE]
IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
IC [auth DE],
JB [auth CE]
IPR001865Small ribosomal subunit protein uS2Family
JC [auth DF],
KB [auth CF]
IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
JC [auth DF],
KB [auth CF]
IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
JC [auth DF],
KB [auth CF]
IPR004087K Homology domainDomain
JC [auth DF],
KB [auth CF]
IPR004044K Homology domain, type 2Domain
JC [auth DF],
KB [auth CF]
IPR015946K homology domain-like, alpha/betaHomologous Superfamily
JC [auth DF],
KB [auth CF]
IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
JC [auth DF],
KB [auth CF]
IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
JC [auth DF],
KB [auth CF]
IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
KC [auth DG],
LB [auth CG]
IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
KC [auth DG],
LB [auth CG]
IPR002942RNA-binding S4 domainDomain
KC [auth DG],
LB [auth CG]
IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
KC [auth DG],
LB [auth CG]
IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
KC [auth DG],
LB [auth CG]
IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
KC [auth DG],
LB [auth CG]
IPR022801Small ribosomal subunit protein uS4Family
LC [auth DH],
MB [auth CH]
IPR000851Small ribosomal subunit protein uS5Family
LC [auth DH],
MB [auth CH]
IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
LC [auth DH],
MB [auth CH]
IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
LC [auth DH],
MB [auth CH]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
LC [auth DH],
MB [auth CH]
IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
LC [auth DH],
MB [auth CH]
IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
LC [auth DH],
MB [auth CH]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
MC [auth DI],
NB [auth CI]
IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
MC [auth DI],
NB [auth CI]
IPR000529Small ribosomal subunit protein bS6Family
MC [auth DI],
NB [auth CI]
IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
MC [auth DI],
NB [auth CI]
IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
MC [auth DI],
NB [auth CI]
IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
NC [auth DJ],
OB [auth CJ]
IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
NC [auth DJ],
OB [auth CJ]
IPR000235Small ribosomal subunit protein uS7Family
NC [auth DJ],
OB [auth CJ]
IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
NC [auth DJ],
OB [auth CJ]
IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
NC [auth DJ],
OB [auth CJ]
IPR023798Small ribosomal subunit protein uS7 domainDomain
PC [auth DL],
QB [auth CL]
IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
PC [auth DL],
QB [auth CL]
IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
PC [auth DL],
QB [auth CL]
IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
PC [auth DL],
QB [auth CL]
IPR000754Small ribosomal subunit protein uS9Family
PC [auth DL],
QB [auth CL]
IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
D [auth AE],
HA [auth BE]
IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
D [auth AE],
HA [auth BE]
IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
D [auth AE],
HA [auth BE]
IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
D [auth AE],
HA [auth BE]
IPR000597Large ribosomal subunit protein uL3Family
QC [auth DM],
RB [auth CM]
IPR001848Small ribosomal subunit protein uS10Family
QC [auth DM],
RB [auth CM]
IPR027486Small ribosomal subunit protein uS10 domainDomain
QC [auth DM],
RB [auth CM]
IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
QC [auth DM],
RB [auth CM]
IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
RC [auth DN],
SB [auth CN]
IPR001971Small ribosomal subunit protein uS11Family
RC [auth DN],
SB [auth CN]
IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
RC [auth DN],
SB [auth CN]
IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
RC [auth DN],
SB [auth CN]
IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
SC [auth DO],
TB [auth CO]
IPR006032Small ribosomal subunit protein uS12Family
SC [auth DO],
TB [auth CO]
IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
SC [auth DO],
TB [auth CO]
IPR005679Ribosomal protein uS12, bacterial-typeFamily
TC [auth DP],
UB [auth CP]
IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
TC [auth DP],
UB [auth CP]
IPR001892Small ribosomal subunit protein uS13Family
TC [auth DP],
UB [auth CP]
IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
TC [auth DP],
UB [auth CP]
IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
TC [auth DP],
UB [auth CP]
IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
VC [auth DR],
WB [auth CR]
IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
VC [auth DR],
WB [auth CR]
IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
VC [auth DR],
WB [auth CR]
IPR000589Small ribosomal subunit protein uS15Family
WC [auth DS],
XB [auth CS]
IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
WC [auth DS],
XB [auth CS]
IPR000307Small ribosomal subunit protein bS16Family
YC [auth DU],
ZB [auth CU]
IPR001648Small ribosomal subunit protein bS18Family
YC [auth DU],
ZB [auth CU]
IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
YC [auth DU],
ZB [auth CU]
IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
AC [auth CV],
ZC [auth DV]
IPR002222Small ribosomal subunit protein uS19Family
AC [auth CV],
ZC [auth DV]
IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
AC [auth CV],
ZC [auth DV]
IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AC [auth CV],
ZC [auth DV]
IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
E [auth AF],
IA [auth BF]
IPR013005Large ribosomal subunit protein uL4-likeFamily
E [auth AF],
IA [auth BF]
IPR002136Large ribosomal subunit protein uL4Family
E [auth AF],
IA [auth BF]
IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
AD [auth DW],
BC [auth CW]
IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
AD [auth DW],
BC [auth CW]
IPR002583Small ribosomal subunit protein bS20Family
BD [auth DX],
CC [auth CX]
IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
BD [auth DX],
CC [auth CX]
IPR031414Small ribosomal subunit protein bTHXFamily
F [auth AG],
JA [auth BG]
IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
F [auth AG],
JA [auth BG]
IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
F [auth AG],
JA [auth BG]
IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
F [auth AG],
JA [auth BG]
IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
F [auth AG],
JA [auth BG]
IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
F [auth AG],
JA [auth BG]
IPR002132Large ribosomal subunit protein uL5Family
H [auth AK],
LA [auth BK]
IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
H [auth AK],
LA [auth BK]
IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
H [auth AK],
LA [auth BK]
IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
H [auth AK],
LA [auth BK]
IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
H [auth AK],
LA [auth BK]
IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
H [auth AK],
LA [auth BK]
IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
H [auth AK],
LA [auth BK]
IPR000244Large ribosomal subunit protein bL9Family
I [auth AM],
MA [auth BM]
IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
I [auth AM],
MA [auth BM]
IPR005822Large ribosomal subunit protein uL13Family
I [auth AM],
MA [auth BM]
IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
I [auth AM],
MA [auth BM]
IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily