4V8Q

Complex of SmpB, a tmRNA fragment and EF-Tu-GDP-Kirromycin with the 70S ribosome


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
A [auth A0]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
N [auth AD]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
N [auth AD]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
O [auth AE]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
P [auth AF]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
B [auth A1]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
U [auth AN]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
V [auth AO]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
W [auth AP]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
X [auth AQ]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
Y [auth AR]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
Z [auth AS]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
AA [auth AT]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
BA [auth AU]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
CA [auth AV]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
C [auth A2]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
DA [auth AW]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
EA [auth AX]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
FA [auth AY]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
HA [auth B2]SCOP2B SuperfamilySmall protein B (SmpB) 8042603 3000956 SCOP2B (2022-06-29)
JA [auth BB]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
KA [auth BC]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
KA [auth BC]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
LA [auth BD]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
MA [auth BE]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
MA [auth BE]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
OA [auth BG]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
QA [auth BI]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
RA [auth BJ]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
SA [auth BK]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
TA [auth BL]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
UA [auth BM]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
E [auth A4]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
XA [auth BP]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
ZA [auth BR]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
AB [auth BS]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
BB [auth BT]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
HB [auth BZ]SCOP2B SuperfamilyRas-like P-loop GTPases 8056510 3002022 SCOP2B (2022-06-29)
HB [auth BZ]SCOP2B SuperfamilyEF-Tu post-G domain-like 8056513 3002024 SCOP2B (2022-06-29)
HB [auth BZ]SCOP2B SuperfamilyEF-Tu post-G domain-like 8056511 3002024 SCOP2B (2022-06-29)
F [auth A5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
G [auth A6]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033191 3001320 SCOP2B (2022-06-29)
I [auth A8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
A [auth A0]Ribosomal_L27e4v8qA01 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal L27 proteinF: Ribosomal_L27ECOD (1.6)
J [auth A9]Ribosomal_L36e4v8qA91 A: few secondary structure elementsX: Ribosomal protein L36 (From Topology)H: Ribosomal protein L36 (From Topology)T: Ribosomal protein L36F: Ribosomal_L36ECOD (1.6)
M [auth AC]Ribosomal_L1_2nd_1e4v8qAC2 A: a+b two layersX: a+b domain in Ribosomal protein L1 (From Topology)H: a+b domain in Ribosomal protein L1 (From Topology)T: a+b domain in Ribosomal protein L1F: Ribosomal_L1_2nd_1ECOD (1.6)
M [auth AC]Ribosomal_L1_1ste4v8qAC1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Rossmann-like domain in Ribosomal protein L1 (From Topology)T: Rossmann-like domain in Ribosomal protein L1F: Ribosomal_L1_1stECOD (1.6)
N [auth AD]Ribosomal_L2_1e4v8qAD2 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_L2_1ECOD (1.6)
N [auth AD]Ribosomal_L2_Ce4v8qAD1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L2_CECOD (1.6)
O [auth AE]Ribosomal_L3e4v8qAE1 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: Ribosomal_L3ECOD (1.6)
P [auth AF]Ribosomal_L4e4v8qAF1 A: a/b three-layered sandwichesX: Ribosomal protein L4 (From Topology)H: Ribosomal protein L4 (From Topology)T: Ribosomal protein L4F: Ribosomal_L4ECOD (1.6)
Q [auth AG]Ribosomal_L5_Ce4v8qAG1 A: a+b two layersX: Ribosomal protein L5 (From Topology)H: Ribosomal protein L5 (From Topology)T: Ribosomal protein L5F: Ribosomal_L5_CECOD (1.6)
R [auth AH]Ribosomal_L6e4v8qAH2 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6ECOD (1.6)
R [auth AH]Ribosomal_L6_1e4v8qAH1 A: a+b two layersX: Ribosomal protein L6 (From Topology)H: Ribosomal protein L6 (From Topology)T: Ribosomal protein L6F: Ribosomal_L6_1ECOD (1.6)
B [auth A1]Ribosomal_L28e4v8qA11 A: few secondary structure elementsX: Ribosomal protein bL28-related (From Homology)H: Ribosomal protein bL28-relatedT: Ribosomal protein L28F: Ribosomal_L28ECOD (1.6)
U [auth AN]Ribosomal_L13e4v8qAN1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal protein L13 and L16-A (From Topology)T: Ribosomal protein L13 and L16-AF: Ribosomal_L13ECOD (1.6)
V [auth AO]Ribosomal_L14e4v8qAO1 A: beta barrelsX: Ribosomal protein L14-likeH: Ribosomal protein L14-related (From Topology)T: Ribosomal protein L14-relatedF: Ribosomal_L14ECOD (1.6)
W [auth AP]Ribosomal_L27Ae4v8qAP1 A: a/b three-layered sandwichesX: Ribosomal protein L13/L15p/L18e/L32eH: Ribosomal proteins L15p and L18e (From Topology)T: Ribosomal proteins L15p and L18eF: Ribosomal_L27AECOD (1.6)
X [auth AQ]Ribosomal_L16e4v8qAQ1 A: a+b complex topologyX: alpha/beta-Hammerhead/Barrel-sandwich hybridH: alpha/beta-Hammerhead/Barrel-sandwich hybridT: Ribosomal protein L10eF: Ribosomal_L16ECOD (1.6)
Y [auth AR]Ribosomal_L17_1e4v8qAR1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Prokaryotic ribosomal protein L17 (From Topology)T: Prokaryotic ribosomal protein L17F: Ribosomal_L17_1ECOD (1.6)
Z [auth AS]Ribosomal_L18pe4v8qAS1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_L18pECOD (1.6)
AA [auth AT]Ribosomal_L19e4v8qAT1 A: beta barrelsX: SH3H: SH3T: SH3F: Ribosomal_L19ECOD (1.6)
BA [auth AU]Ribosomal_L20e4v8qAU1 A: alpha arraysX: PABP domain-likeH: Ribosomal protein L20 (From Topology)T: Ribosomal protein L20F: Ribosomal_L20ECOD (1.6)
CA [auth AV]Ribosomal_L21pe4v8qAV1 A: beta barrelsX: Ribosomal protein L21p (From Topology)H: Ribosomal protein L21p (From Topology)T: Ribosomal protein L21pF: Ribosomal_L21pECOD (1.6)
C [auth A2]Ribosomal_L29e4v8qA21 A: alpha bundlesX: Long alpha-hairpinH: Ribosomal protein L29 (L29p) (From Topology)T: Ribosomal protein L29 (L29p)F: Ribosomal_L29ECOD (1.6)
DA [auth AW]Ribosomal_L22e4v8qAW1 A: a+b two layersX: Enolase-N/ribosomal proteinH: Ribosomal protein L22 (From Topology)T: Ribosomal protein L22F: Ribosomal_L22ECOD (1.6)
EA [auth AX]Ribosomal_L23_2e4v8qAX1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal proteins S24e, L23 and L15e (From Topology)T: Ribosomal proteins S24e, L23 and L15eF: Ribosomal_L23_2ECOD (1.6)
FA [auth AY]ribosomal_L24e4v8qAY1 A: beta barrelsX: SH3H: SH3T: SH3F: ribosomal_L24ECOD (1.6)
GA [auth AZ]Ribosomal_L25pe4v8qAZ2 A: beta barrelsX: Ribosomal protein L25-likeH: Ribosomal protein L25-like (From Topology)T: Ribosomal protein L25-likeF: Ribosomal_L25pECOD (1.6)
GA [auth AZ]Ribosomal_TL5_Ce4v8qAZ1 A: a+b complex topologyX: Ribosomal protein TL5/L25 C-terminal domain-likeH: Ribosomal protein TL5/L25 C-terminal domain-related (From Topology)T: Ribosomal protein TL5/L25 C-terminal domain-relatedF: Ribosomal_TL5_CECOD (1.6)
HA [auth B2]SmpBe4v8qB21 A: beta barrelsX: OB-foldH: Small protein B (SmpB) (From Topology)T: Small protein B (SmpB)F: SmpBECOD (1.6)
JA [auth BB]Ribosomal_S2e4v8qBB1 A: a/b three-layered sandwichesX: Flavodoxin-likeH: Ribosomal protein S2/SIS domain (From Topology)T: Ribosomal protein S2/SIS domainF: Ribosomal_S2ECOD (1.6)
KA [auth BC]Ribosomal_S3_Ce4v8qBC1 A: a+b two layersX: T-foldH: Ribosomal protein S3-C (From Topology)T: Ribosomal protein S3-CF: Ribosomal_S3_CECOD (1.6)
KA [auth BC]KH_2_1e4v8qBC2 A: a+b two layersX: Alpha-lytic protease prodomain-likeH: KH-domainsT: Prokaryotic type KH domain (KH-domain type II)F: KH_2_1ECOD (1.6)
LA [auth BD]S4e4v8qBD1 A: a+b two layersX: beta-GraspH: Ubiquitin-relatedT: Alpha-L RNA-binding motifF: S4ECOD (1.6)
MA [auth BE]Ribosomal_S5_Ce4v8qBE2 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S5_CECOD (1.6)
MA [auth BE]Ribosomal_S5e4v8qBE1 A: a+b two layersX: dsRBD-likeH: dsRNA-binding domain-like (From Topology)T: dsRNA-binding domain-likeF: Ribosomal_S5ECOD (1.6)
D [auth A3]Ribosomal_L30e4v8qA31 A: a+b two layersX: Ribosomal protein L30p/L7e (From Topology)H: Ribosomal protein L30p/L7e (From Topology)T: Ribosomal protein L30p/L7eF: Ribosomal_L30ECOD (1.6)
NA [auth BF]Ribosomal_S6e4v8qBF1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S6 (From Topology)T: Ribosomal protein S6F: Ribosomal_S6ECOD (1.6)
OA [auth BG]Ribosomal_S7_1e4v8qBG1 A: alpha arraysX: Ribosomal protein S7 (From Topology)H: Ribosomal protein S7 (From Topology)T: Ribosomal protein S7F: Ribosomal_S7_1ECOD (1.6)
PA [auth BH]Ribosomal_S8_Ne4v8qBH1 A: a+b two layersX: R3H domain-likeH: Ribosomal protein S8, N-terminal domain (From Topology)T: Ribosomal protein S8, N-terminal domainF: Ribosomal_S8_NECOD (1.6)
PA [auth BH]Ribosomal_S8_Ce4v8qBH2 A: a+b two layersX: Ribosomal protein S8, C-terminal domain (From Topology)H: Ribosomal protein S8, C-terminal domain (From Topology)T: Ribosomal protein S8, C-terminal domainF: Ribosomal_S8_CECOD (1.6)
QA [auth BI]Ribosomal_S9e4v8qBI1 A: a+b two layersX: Ribosomal protein S5 domain 2-like (From Topology)H: Ribosomal protein S5 domain 2-like (From Topology)T: Ribosomal protein S5 domain 2-likeF: Ribosomal_S9ECOD (1.6)
RA [auth BJ]Ribosomal_S10e4v8qBJ1 A: a+b two layersX: Alpha-beta plaitsH: Ribosomal protein S10 (From Topology)T: Ribosomal protein S10F: Ribosomal_S10ECOD (1.6)
SA [auth BK]Ribosomal_S11e4v8qBK1 A: mixed a+b and a/bX: Ribonuclease H-likeH: Ribonuclease H-like (From Topology)T: Ribonuclease H-likeF: Ribosomal_S11ECOD (1.6)
TA [auth BL]Ribosom_S12_S23e4v8qBL1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosom_S12_S23ECOD (1.6)
UA [auth BM]Ribosomal_S13_1e4v8qBM1 A: alpha arraysX: HhH/H2THH: H2TH (From Topology)T: H2THF: Ribosomal_S13_1ECOD (1.6)
VA [auth BN]Ribosomal_S14e4v8qBN1 A: few secondary structure elementsX: Glucocorticoid receptor-likeH: LIM domain-likeT: LIM domain-likeF: Ribosomal_S14ECOD (1.6)
WA [auth BO]Ribosomal_S15_1e4v8qBO1 A: alpha arraysX: S15/NS1 RNA-binding domain (From Topology)H: S15/NS1 RNA-binding domain (From Topology)T: S15/NS1 RNA-binding domainF: Ribosomal_S15_1ECOD (1.6)
E [auth A4]Ribosomal_L31e4v8qA41 A: few secondary structure elementsX: Ribosomal protein L31p (From Topology)H: Ribosomal protein L31p (From Topology)T: Ribosomal protein L31pF: Ribosomal_L31ECOD (1.6)
XA [auth BP]Ribosomal_S16_1e4v8qBP1 A: a+b two layersX: Ribosomal protein S16 (From Topology)H: Ribosomal protein S16 (From Topology)T: Ribosomal protein S16F: Ribosomal_S16_1ECOD (1.6)
YA [auth BQ]Ribosomal_S17_1e4v8qBQ1 A: beta barrelsX: OB-foldH: Nucleic acid-binding proteins (From Topology)T: Nucleic acid-binding proteinsF: Ribosomal_S17_1ECOD (1.6)
ZA [auth BR]Ribosomal_S18e4v8qBR1 A: alpha arraysX: HTHH: HTHT: tri-helicalF: Ribosomal_S18ECOD (1.6)
AB [auth BS]Ribosomal_S19e4v8qBS1 A: a+b two layersX: Ribosomal protein S19 (From Topology)H: Ribosomal protein S19 (From Topology)T: Ribosomal protein S19F: Ribosomal_S19ECOD (1.6)
BB [auth BT]Ribosomal_S20pe4v8qBT1 A: alpha bundlesX: Spectrin repeat-likeH: Ribosomal protein S20 (From Topology)T: Ribosomal protein S20F: Ribosomal_S20pECOD (1.6)
HB [auth BZ]GTP_EFTU_D2_1e4v8qBZ3 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Alanine racemase-CF: GTP_EFTU_D2_1ECOD (1.6)
HB [auth BZ]GTP_EFTU_D3e4v8qBZ2 A: beta barrelsX: cradle loop barrelH: RIFT-relatedT: Aminomethyltransferase beta-barrel domainF: GTP_EFTU_D3ECOD (1.6)
HB [auth BZ]MnmE_helical_2nde4v8qBZ1 A: a/b three-layered sandwichesX: P-loop domains-likeH: P-loop domains-relatedT: P-loop containing nucleoside triphosphate hydrolasesF: MnmE_helical_2ndECOD (1.6)
F [auth A5]Ribosomal_L32pe4v8qA51 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L32pECOD (1.6)
G [auth A6]Ribosomal_L33e4v8qA61 A: few secondary structure elementsX: Rubredoxin-likeH: Rubredoxin-relatedT: Rubredoxin-relatedF: Ribosomal_L33ECOD (1.6)
H [auth A7]Ribosomal_L34e4v8qA71 A: extended segmentsX: 50S ribosomal protein L34 (From Topology)H: 50S ribosomal protein L34 (From Topology)T: 50S ribosomal protein L34F: Ribosomal_L34ECOD (1.6)
I [auth A8]Ribosomal_L35pe4v8qA81 A: a+b two layersX: Ribosomal protein L35p (From Topology)H: Ribosomal protein L35p (From Topology)T: Ribosomal protein L35pF: Ribosomal_L35pECOD (1.6)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A [auth A0]PF01016Ribosomal L27 protein (Ribosomal_L27)Ribosomal L27 protein- Family
J [auth A9]PF00444Ribosomal protein L36 (Ribosomal_L36)Ribosomal protein L36- Domain
M [auth AC]PF00687Ribosomal protein L1p/L10e family (Ribosomal_L1)Ribosomal protein L1p/L10e familyThis family includes prokaryotic L1 and eukaryotic L10.Domain
N [auth AD]PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domain- Domain
N [auth AD]PF00181Ribosomal Proteins L2, RNA binding domain (Ribosomal_L2)Ribosomal Proteins L2, RNA binding domain- Domain
O [auth AE]PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
P [auth AF]PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
Q [auth AG]PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5- Domain
Q [auth AG]PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281.Domain
B [auth A1]PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
U [auth AN]PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
V [auth AO]PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23e- Domain
W [auth AP]PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A- Family
X [auth AQ]PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10e- Domain
Y [auth AR]PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
AA [auth AT]PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
BA [auth AU]PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
CA [auth AV]PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
C [auth A2]PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
DA [auth AW]PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes.Domain
EA [auth AX]PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
FA [auth AY]PF17136Ribosomal proteins 50S L24/mitochondrial 39S L24 (ribosomal_L24)Ribosomal proteins 50S L24/mitochondrial 39S L24- Family
FA [auth AY]PF00467KOW motif (KOW)KOW motif- Family
GA [auth AZ]PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
GA [auth AZ]PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress.Domain
HA [auth B2]PF01668SmpB protein (SmpB)SmpB protein- Family
JA [auth BB]PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
KA [auth BC]PF07650KH domain (KH_2)KH domain- Domain
KA [auth BC]PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer.Domain
LA [auth BD]PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
LA [auth BD]PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MA [auth BE]PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domain- Domain
MA [auth BE]PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domain- Domain
D [auth A3]PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7.Domain
NA [auth BF]PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6- Domain
QA [auth BI]PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
RA [auth BJ]PF00338Ribosomal protein S10p/S20e (Ribosomal_S10)Ribosomal protein S10p/S20eThis family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes.Domain
SA [auth BK]PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family
TA [auth BL]PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23- Family
UA [auth BM]PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
WA [auth BO]PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15- Domain
XA [auth BP]PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
ZA [auth BR]PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
HB [auth BZ]PF00009Elongation factor Tu GTP binding domain (GTP_EFTU)Elongation factor Tu GTP binding domainThis domain contains a P-loop motif, also found in several other families such as Pfam:PF00071, Pfam:PF00025 and Pfam:PF00063. Elongation factor Tu consists of three structural domains, this plus two C-terminal beta barrel domains.Domain
HB [auth BZ]PF03143Elongation factor Tu C-terminal domain (GTP_EFTU_D3)Elongation factor Tu C-terminal domainElongation factor Tu consists of three structural domains, this is the third domain. This domain adopts a beta barrel structure. This the third domain is involved in binding to both charged tRNA [1] and binding to EF-Ts Pfam:PF00889 [2].Domain
HB [auth BZ]PF03144Elongation factor Tu domain 2 (GTP_EFTU_D2)Elongation factor Tu domain 2Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as e ...Elongation factor Tu consists of three structural domains, this is the second domain. This domain adopts a beta barrel structure. This the second domain is involved in binding to charged tRNA [1]. This domain is also found in other proteins such as elongation factor G and translation initiation factor IF-2. This domain is structurally related to Pfam:PF03143, and in fact has weak sequence matches to this domain.
Domain
F [auth A5]PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
G [auth A6]PF00471Ribosomal protein L33 (Ribosomal_L33)Ribosomal protein L33- Family
H [auth A7]PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
I [auth A8]PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A [auth A0]50S RIBOSOMAL PROTEIN L27
J [auth A9]50S RIBOSOMAL PROTEIN L36
K [auth AA]23S ribosomal RNA---
L [auth AB]5S ribosomal RNA---
M [auth AC]50S RIBOSOMAL PROTEIN L1
N [auth AD]50S RIBOSOMAL PROTEIN L2
O [auth AE]50S RIBOSOMAL PROTEIN L3
P [auth AF]50S RIBOSOMAL PROTEIN L4
Q [auth AG]50S RIBOSOMAL PROTEIN L5
R [auth AH]50S RIBOSOMAL PROTEIN L6---
S [auth AJ]50S RIBOSOMAL PROTEIN L10---
B [auth A1]50S RIBOSOMAL PROTEIN L28
T [auth AK]50S RIBOSOMAL PROTEIN L11---
U [auth AN]50S RIBOSOMAL PROTEIN L13
V [auth AO]50S RIBOSOMAL PROTEIN L14
W [auth AP]50S RIBOSOMAL PROTEIN L15
X [auth AQ]50S RIBOSOMAL PROTEIN L16
Y [auth AR]50S RIBOSOMAL PROTEIN L17
Z [auth AS]50S RIBOSOMAL PROTEIN L18
AA [auth AT]50S RIBOSOMAL PROTEIN L19
BA [auth AU]50S RIBOSOMAL PROTEIN L20
CA [auth AV]50S RIBOSOMAL PROTEIN L21
C [auth A2]50S RIBOSOMAL PROTEIN L29
DA [auth AW]50S RIBOSOMAL PROTEIN L22
EA [auth AX]50S RIBOSOMAL PROTEIN L23
FA [auth AY]50S RIBOSOMAL PROTEIN L24
GA [auth AZ]50S RIBOSOMAL PROTEIN L25
HA [auth B2]SMALL PROTEIN B SMPB
IA [auth BA]16S ribosomal RNA---
JA [auth BB]30S RIBOSOMAL PROTEIN S2
KA [auth BC]30S RIBOSOMAL PROTEIN S3
LA [auth BD]30S RIBOSOMAL PROTEIN S4
MA [auth BE]30S RIBOSOMAL PROTEIN S5
D [auth A3]50S RIBOSOMAL PROTEIN L30
NA [auth BF]30S RIBOSOMAL PROTEIN S6
OA [auth BG]30S RIBOSOMAL PROTEIN S7
PA [auth BH]30S RIBOSOMAL PROTEIN S8---
QA [auth BI]30S RIBOSOMAL PROTEIN S9
RA [auth BJ]30S RIBOSOMAL PROTEIN S10
SA [auth BK]30S RIBOSOMAL PROTEIN S11
TA [auth BL]30S RIBOSOMAL PROTEIN S12
UA [auth BM]30S RIBOSOMAL PROTEIN S13
VA [auth BN]30S RIBOSOMAL PROTEIN S14---
WA [auth BO]30S RIBOSOMAL PROTEIN S15
E [auth A4]50S RIBOSOMAL PROTEIN L31
XA [auth BP]30S RIBOSOMAL PROTEIN S16
YA [auth BQ]30S RIBOSOMAL PROTEIN S17---
ZA [auth BR]30S RIBOSOMAL PROTEIN S18
AB [auth BS]30S RIBOSOMAL PROTEIN S19
BB [auth BT]30S RIBOSOMAL PROTEIN S20
CB [auth BU]30S RIBOSOMAL PROTEIN THX -
DB [auth BV],
EB [auth BW]
E-SITE or P-SITE TRNA FMET---
FB [auth BX]MRNA---
GB [auth BY]TMRNA DELA---
HB [auth BZ]ELONGATION FACTOR TU -
F [auth A5]50S RIBOSOMAL PROTEIN L32
G [auth A6]50S RIBOSOMAL PROTEIN L33
H [auth A7]50S RIBOSOMAL PROTEIN L34
I [auth A8]50S RIBOSOMAL PROTEIN L35

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A [auth A0]IPR001684Large ribosomal subunit protein bL27Family
A [auth A0]IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
J [auth A9]IPR000473Large ribosomal subunit protein bL36Family
J [auth A9]IPR035977Large ribosomal subunit protein bL36 superfamilyHomologous Superfamily
M [auth AC]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
M [auth AC]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
M [auth AC]IPR005878Large ribosomal subunit protein uL1, bacterial-typeFamily
M [auth AC]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
M [auth AC]IPR002143Large ribosomal subunit protein uL1Family
M [auth AC]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
N [auth AD]IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
N [auth AD]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
N [auth AD]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
N [auth AD]IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
N [auth AD]IPR005880Large ribosomal subunit protein uL2, bacterial/organellar-typeFamily
N [auth AD]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
N [auth AD]IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
N [auth AD]IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
N [auth AD]IPR002171Large ribosomal subunit protein uL2Family
O [auth AE]IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
O [auth AE]IPR019927Large ribosomal subunit protein uL3, bacterial/organelle-typeFamily
O [auth AE]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
O [auth AE]IPR000597Large ribosomal subunit protein uL3Family
P [auth AF]IPR013005Large ribosomal subunit protein uL4-likeFamily
P [auth AF]IPR002136Large ribosomal subunit protein uL4Family
P [auth AF]IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
Q [auth AG]IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
Q [auth AG]IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
Q [auth AG]IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
Q [auth AG]IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
Q [auth AG]IPR020930Large ribosomal subunit protein uL5, bacterial-typeFamily
Q [auth AG]IPR002132Large ribosomal subunit protein uL5Family
B [auth A1]IPR001383Large ribosomal subunit protein bL28, bacterial-typeFamily
B [auth A1]IPR050096Bacterial ribosomal protein bL28Family
B [auth A1]IPR026569Large ribosomal subunit protein bL28Family
B [auth A1]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
U [auth AN]IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
U [auth AN]IPR005822Large ribosomal subunit protein uL13Family
U [auth AN]IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
U [auth AN]IPR005823Large ribosomal subunit protein uL13, bacterial-typeFamily
V [auth AO]IPR005745Large ribosomal subunit protein uL14, bacterial-typeFamily
V [auth AO]IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
V [auth AO]IPR000218Large ribosomal subunit protein uL14Family
V [auth AO]IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
W [auth AP]IPR005749Large ribosomal subunit protein uL15, bacterial-typeFamily
W [auth AP]IPR021131Large ribosomal subunit protein uL15/eL18Domain
W [auth AP]IPR030878Large ribosomal subunit protein uL15Family
W [auth AP]IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
W [auth AP]IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
X [auth AQ]IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
X [auth AQ]IPR000114Large ribosomal subunit protein uL16, bacterial-typeFamily
X [auth AQ]IPR016180Large ribosomal subunit protein uL16 domainDomain
X [auth AQ]IPR047873Large ribosomal subunit protein uL16Family
Y [auth AR]IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
Y [auth AR]IPR000456Large ribosomal subunit protein bL17Family
Z [auth AS]IPR005484Large ribosomal subunit protein uL18Family
Z [auth AS]IPR004389Large ribosomal subunit protein uL18, bacterial-typeFamily
AA [auth AT]IPR001857Large ribosomal subunit protein bL19Family
AA [auth AT]IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
AA [auth AT]IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
AA [auth AT]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
BA [auth AU]IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
BA [auth AU]IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
BA [auth AU]IPR005813Large ribosomal subunit protein bL20Family
CA [auth AV]IPR028909Large ribosomal subunit protein bL21-likeFamily
CA [auth AV]IPR001787Large ribosomal subunit protein bL21Family
CA [auth AV]IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
C [auth A2]IPR050063Universal ribosomal protein uL29Family
C [auth A2]IPR001854Large ribosomal subunit protein uL29Family
C [auth A2]IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
C [auth A2]IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
DA [auth AW]IPR047867Large ribosomal subunit protein uL22, bacterial/organelle-typeFamily
DA [auth AW]IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
DA [auth AW]IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
DA [auth AW]IPR001063Large ribosomal subunit protein uL22Family
DA [auth AW]IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
EA [auth AX]IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
EA [auth AX]IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
EA [auth AX]IPR013025Large ribosomal subunit protein uL23-likeFamily
FA [auth AY]IPR003256Large ribosomal subunit protein uL24Family
FA [auth AY]IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
FA [auth AY]IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
FA [auth AY]IPR005824KOWDomain
FA [auth AY]IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
FA [auth AY]IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
GA [auth AZ]IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
GA [auth AZ]IPR001021Ribosomal protein bL25, long-formFamily
GA [auth AZ]IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
GA [auth AZ]IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
GA [auth AZ]IPR020057Large ribosomal subunit protein bL25, beta domainDomain
GA [auth AZ]IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
GA [auth AZ]IPR050070Bacterial ribosomal protein bL25Family
HA [auth B2]IPR020081SsrA-binding protein, conserved siteConserved Site
HA [auth B2]IPR023620Small protein BHomologous Superfamily
HA [auth B2]IPR000037SsrA-binding proteinFamily
JA [auth BB]IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
JA [auth BB]IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
JA [auth BB]IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
JA [auth BB]IPR001865Small ribosomal subunit protein uS2Family
KA [auth BC]IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
KA [auth BC]IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
KA [auth BC]IPR004087K Homology domainDomain
KA [auth BC]IPR004044K Homology domain, type 2Domain
KA [auth BC]IPR015946K homology domain-like, alpha/betaHomologous Superfamily
KA [auth BC]IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
KA [auth BC]IPR005704Small ribosomal subunit protein uS3, bacterial-typeFamily
KA [auth BC]IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
LA [auth BD]IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
LA [auth BD]IPR002942RNA-binding S4 domainDomain
LA [auth BD]IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
LA [auth BD]IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
LA [auth BD]IPR005709Small ribosomal subunit protein uS4, bacterial-typeFamily
LA [auth BD]IPR022801Small ribosomal subunit protein uS4Family
MA [auth BE]IPR000851Small ribosomal subunit protein uS5Family
MA [auth BE]IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
MA [auth BE]IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
MA [auth BE]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
MA [auth BE]IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
MA [auth BE]IPR005712Small ribosomal subunit protein uS5, bacterial-typeFamily
MA [auth BE]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
D [auth A3]IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
D [auth A3]IPR005996Large ribosomal subunit protein uL30, bacterial-typeFamily
D [auth A3]IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
D [auth A3]IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
NA [auth BF]IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
NA [auth BF]IPR000529Small ribosomal subunit protein bS6Family
NA [auth BF]IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
NA [auth BF]IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
NA [auth BF]IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
OA [auth BG]IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
OA [auth BG]IPR000235Small ribosomal subunit protein uS7Family
OA [auth BG]IPR005717Small ribosomal subunit protein uS7, bacterial/organellar-typeFamily
OA [auth BG]IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
OA [auth BG]IPR023798Small ribosomal subunit protein uS7 domainDomain
QA [auth BI]IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
QA [auth BI]IPR023035Small ribosomal subunit protein uS9, bacterial/plastidFamily
QA [auth BI]IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
QA [auth BI]IPR000754Small ribosomal subunit protein uS9Family
QA [auth BI]IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
RA [auth BJ]IPR001848Small ribosomal subunit protein uS10Family
RA [auth BJ]IPR027486Small ribosomal subunit protein uS10 domainDomain
RA [auth BJ]IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
RA [auth BJ]IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site
SA [auth BK]IPR001971Small ribosomal subunit protein uS11Family
SA [auth BK]IPR019981Small ribosomal subunit protein uS11, bacterial-typeFamily
SA [auth BK]IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
SA [auth BK]IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
TA [auth BL]IPR006032Small ribosomal subunit protein uS12Family
TA [auth BL]IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
TA [auth BL]IPR005679Ribosomal protein uS12, bacterial-typeFamily
UA [auth BM]IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
UA [auth BM]IPR001892Small ribosomal subunit protein uS13Family
UA [auth BM]IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
UA [auth BM]IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
UA [auth BM]IPR019980Small ribosomal subunit protein uS13, bacterial-typeFamily
WA [auth BO]IPR005290Small ribosomal subunit protein uS15, bacterial-typeFamily
WA [auth BO]IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
WA [auth BO]IPR000589Small ribosomal subunit protein uS15Family
E [auth A4]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
E [auth A4]IPR027491Large ribosomal subunit protein bL31 type AFamily
E [auth A4]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
E [auth A4]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
XA [auth BP]IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
XA [auth BP]IPR000307Small ribosomal subunit protein bS16Family
ZA [auth BR]IPR001648Small ribosomal subunit protein bS18Family
ZA [auth BR]IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
ZA [auth BR]IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
AB [auth BS]IPR002222Small ribosomal subunit protein uS19Family
AB [auth BS]IPR005732Small ribosomal subunit protein uS19, bacterial-typeFamily
AB [auth BS]IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
AB [auth BS]IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
BB [auth BT]IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
BB [auth BT]IPR002583Small ribosomal subunit protein bS20Family
CB [auth BU]IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
CB [auth BU]IPR031414Small ribosomal subunit protein bTHXFamily
HB [auth BZ]IPR005225Small GTP-binding domainDomain
HB [auth BZ]IPR000795Translational (tr)-type GTP-binding domainDomain
HB [auth BZ]IPR033720Elongation factor Tu, domain 2Domain
HB [auth BZ]IPR009001Translation elongation factor EF1A/initiation factor IF2gamma, C-terminalHomologous Superfamily
HB [auth BZ]IPR031157Tr-type G domain, conserved siteConserved Site
HB [auth BZ]IPR004541Translation elongation factor EFTu/EF1A, bacterial/organelleFamily
HB [auth BZ]IPR004161Translation elongation factor EFTu-like, domain 2Domain
HB [auth BZ]IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
HB [auth BZ]IPR004160Translation elongation factor EFTu/EF1A, C-terminalDomain
HB [auth BZ]IPR050055Elongation factor Tu GTPaseFamily
HB [auth BZ]IPR041709Elongation factor Tu (EF-Tu), GTP-binding domainDomain
HB [auth BZ]IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
F [auth A5]IPR002677Large ribosomal subunit protein bL32Family
F [auth A5]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
F [auth A5]IPR044957Large ribosomal subunit protein bL32, bacterial typeFamily
G [auth A6]IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
G [auth A6]IPR038584Large ribosomal subunit protein bL33 superfamilyHomologous Superfamily
G [auth A6]IPR001705Large ribosomal subunit protein bL33Family
G [auth A6]IPR018264Large ribosomal subunit protein bL33, conserved siteConserved Site
H [auth A7]IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
H [auth A7]IPR000271Large ribosomal subunit protein bL34Family
I [auth A8]IPR021137Large ribosomal subunit protein bL35-likeFamily
I [auth A8]IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
I [auth A8]IPR001706Large ribosomal subunit protein bL35Family
I [auth A8]IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily