4Z32 | pdb_00004z32

Crystal Structure of the FERM-SH2 Domains of Jak2


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
HMMS1_Ne4z32H1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
GMMS1_Ne4z32G1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
FMMS1_Ne4z32F1 A: a/b three-layered sandwichesX: beta-propeller-likeH: beta-propellerT: 7-bladedF: MMS1_NECOD (v294.1)
EFer4, Fer4_7, Fer4_10e4z32E1 A: a/b three-layered sandwichesX: Rossmann-likeH: Rossmann-relatedT: Aha1/BPI domain-likeF: Fer4, Fer4_7, Fer4_10ECOD (v294.1)
DSPRYe4z32D1 A: a/b three-layered sandwichesX: Type II ABC importer transmembrane domain foldH: Type II ABC importer transmembrane domain foldT: Type II ABC importer transmembrane domain foldF: SPRYECOD (v294.1)
Ce4z32C1 A: a/b three-layered sandwichesX: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4F:ECOD (v294.1)
BCDC48_Ne4z32B1 A: a/b three-layered sandwichesX: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4H: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4T: Sulfite reductase hemoprotein (SiRHP), domains 2 and 4F: CDC48_NECOD (v294.1)
Ae4z32A1 A: a/b three-layered sandwichesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF:ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
H2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (utative)
H3.30.505.10 Alpha Beta 2-Layer Sandwich SHC Adaptor Protein SH2 domainCATH (utative)
G2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (utative)
G3.30.505.10 Alpha Beta 2-Layer Sandwich SHC Adaptor Protein SH2 domainCATH (utative)
F2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (utative)
F3.30.505.10 Alpha Beta 2-Layer Sandwich SHC Adaptor Protein SH2 domainCATH (utative)
E2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (utative)
E3.30.505.10 Alpha Beta 2-Layer Sandwich SHC Adaptor Protein SH2 domainCATH (utative)
D2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (utative)
D3.30.505.10 Alpha Beta 2-Layer Sandwich SHC Adaptor Protein SH2 domainCATH (utative)
C2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (utative)
C3.30.505.10 Alpha Beta 2-Layer Sandwich SHC Adaptor Protein SH2 domainCATH (utative)
B2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (utative)
B3.30.505.10 Alpha Beta 2-Layer Sandwich SHC Adaptor Protein SH2 domainCATH (utative)
A2.30.29.30 Mainly Beta Roll PH-domain like Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB)CATH (utative)
A3.30.505.10 Alpha Beta 2-Layer Sandwich SHC Adaptor Protein SH2 domainCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D, E
PF18377FERM F2 acyl-CoA binding protein-like domain (FERM_F2)FERM F2 acyl-CoA binding protein-like domainThis is an F2 lobe domain consisting of an acyl-CoA binding protein fold found in FERM region of Jak-family tyrosine kinases [1]. Multidomain JAK molecules interact with receptors through their FERM and SH2-like domains, triggering a series of phosph ...This is an F2 lobe domain consisting of an acyl-CoA binding protein fold found in FERM region of Jak-family tyrosine kinases [1]. Multidomain JAK molecules interact with receptors through their FERM and SH2-like domains, triggering a series of phosphorylation events, resulting in the activation of their kinase domains [2]. Overall, the FERM region maintains the typical three-lobed architecture, with an F1 lobe consisting of a ubiquitin-like fold, an F2 lobe consisting of an acyl-CoA binding protein fold, and an F3 lobe consisting of a pleckstrin-homology (PH) fold. JAK1 FERM-F2 domain has been shown to act as the interaction site for the IFNLR1 box1 motif (PxxLxF) of class II cytokine receptors which is essential for kinase activation [3].
Domain
A, B, C, D, E
PF21990SH2 domain (SH2_1)SH2 domainThe SH2 domain is a protein module that folds to form a pocket into which a phosphorylated tyrosine residue fits. SH2 domains discriminate their targets by making important contacts with residues from position +1 up to +4 in the ligand peptide. SH2 d ...The SH2 domain is a protein module that folds to form a pocket into which a phosphorylated tyrosine residue fits. SH2 domains discriminate their targets by making important contacts with residues from position +1 up to +4 in the ligand peptide. SH2 domain comprises two alpha-helices packed against each side of a central beta-sheet.
Domain
A, B, C, D, E
PF17887Jak1 pleckstrin homology-like domain (Jak1_Phl)Jak1 pleckstrin homology-like domainThis entry is for the pleckstrin homology-like (PHL) subdomain found in Jak1 proteins. JAK1 is a member of the Janus kinase (JAK) family of non-receptor tyrosine kinases that are activated in response to cytokines and interferons. PHL (residues 283-4 ...This entry is for the pleckstrin homology-like (PHL) subdomain found in Jak1 proteins. JAK1 is a member of the Janus kinase (JAK) family of non-receptor tyrosine kinases that are activated in response to cytokines and interferons. PHL (residues 283-419) together with the N-terminal ubiquitin-like subdomain (residues 36-111) and an acyl-coenzyme A binding protein-like subdomain (residues 148-282), associate into a canonical tri-lobed FERM domain [1].
Domain
A, B, C, D, E
PF18379FERM F1 ubiquitin-like domain (FERM_F1)FERM F1 ubiquitin-like domainThis is an F1 lobe domain consisting of a ubiquitin like fold found in FERM region of Jak-family tyrosine kinases [1]. Multidomain JAK molecules interact with receptors through their FERM and SH2-like domains, triggering a series of phosphorylation e ...This is an F1 lobe domain consisting of a ubiquitin like fold found in FERM region of Jak-family tyrosine kinases [1]. Multidomain JAK molecules interact with receptors through their FERM and SH2-like domains, triggering a series of phosphorylation events, resulting in the activation of their kinase domains [2]. Overall, the FERM region maintains the typical three-lobed architecture, with an F1 lobe consisting of a ubiquitin-like fold, an F2 lobe consisting of an acyl-CoA binding protein fold, and an F3 lobe consisting of a pleckstrin-homology (PH) fold [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D, E
Tyrosine-protein kinase JAK2

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D, E
IPR020635Tyrosine-protein kinase, catalytic domainDomain
A, B, C, D, E
IPR000719Protein kinase domainDomain
A, B, C, D, E
IPR041381JAK1-3/TYK2, pleckstrin homology-like domainDomain
A, B, C, D, E
IPR017441Protein kinase, ATP binding siteBinding Site
A, B, C, D, E
IPR036860SH2 domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainDomain
A, B, C, D, E
IPR051286Janus Kinase (JAK)Family
A, B, C, D, E
IPR041046JAK, FERM F2 lobe domainDomain
A, B, C, D, E
IPR019749Band 4.1 domainDomain
A, B, C, D, E
IPR020693Tyrosine-protein kinase, non-receptor Jak2Family
A, B, C, D, E
IPR035860Tyrosine-protein kinase JAK2, SH2 domainDomain
A, B, C, D, E
IPR037838JAK2, FERM domain C-lobeDomain
A, B, C, D, E
IPR000299FERM domainDomain
A, B, C, D, E
IPR016251Tyrosine-protein kinase, non-receptor Jak/Tyk2Family
A, B, C, D, E
IPR008266Tyrosine-protein kinase, active siteActive Site
A, B, C, D, E
IPR019748FERM central domainDomain
A, B, C, D, E
IPR035963FERM superfamily, second domainHomologous Superfamily
A, B, C, D, E
IPR000980SH2 domainDomain
A, B, C, D, E
IPR011993PH-like domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR035588Janus kinase 2, pseudokinase domainDomain
A, B, C, D, E
IPR035589Janus kinase 2, catalytic domainDomain
A, B, C, D, E
IPR011009Protein kinase-like domain superfamilyHomologous Superfamily
A, B, C, D, E
IPR041155FERM F1 lobe ubiquitin-like domainDomain

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
A, B, C, D, E
PharosO60674