5COB | pdb_00005cob

Crystal structure of iridoid synthase in complex with NADP+ and 8-oxogeranial at 2.65-angstrom resolution

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
DCoV_NSP15_Ce5cobD1 A: alpha arraysX: HTHH: Baseplate wedge protein gp6 helical domainT: Baseplate wedge protein gp6 helical domainF: CoV_NSP15_CECOD (v295)
CCoV_NSP15_Ce5cobC1 A: alpha arraysX: HTHH: Baseplate wedge protein gp6 helical domainT: Baseplate wedge protein gp6 helical domainF: CoV_NSP15_CECOD (v295)
BCoV_NSP15_Ce5cobB1 A: alpha arraysX: HTHH: Baseplate wedge protein gp6 helical domainT: Baseplate wedge protein gp6 helical domainF: CoV_NSP15_CECOD (v295)
ACoV_NSP15_Ce5cobA1 A: alpha arraysX: HTHH: Baseplate wedge protein gp6 helical domainT: Baseplate wedge protein gp6 helical domainF: CoV_NSP15_CECOD (v295)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
C3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
B3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)
A3.40.50.720 Alpha Beta 3-Layer(aba) Sandwich Rossmann fold NAD(P)-binding Rossmann-like DomainCATH (4.3.0)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Iridoid synthase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR055222PRISE-like, Rossmann-fold domainDomain
A, B, C, D
IPR036291NAD(P)-binding domain superfamilyHomologous Superfamily