5DHM
Crystal structure of the fimbrial protein Mfa4 from Porphyromonas gingivalis
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B [auth C] | SCOP2B Superfamily | FimA/Mfa2-like | 8102571 | 3002736 | SCOP2B (2022-06-29) |
B [auth C] | SCOP2B Superfamily | FimA/Mfa2-like | 8102564 | 3002736 | SCOP2B (2022-06-29) |
D | SCOP2 Family | Major fimbrial protein FimA-like | 8048037 | 4005929 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | FimA/Mfa2-like | 8102571 | 3002736 | SCOP2 (2022-06-29) |
D | SCOP2 Superfamily | FimA/Mfa2-like | 8102564 | 3002736 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | EUF07740 | e5dhmA2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: EUF07740 | ECOD (1.6) |
C [auth B] | EUF07740 | e5dhmB2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: EUF07740 | ECOD (1.6) |
C [auth B] | P_gingi_FimA_like_1 | e5dhmB1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Prealbumin-like | F: P_gingi_FimA_like_1 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
B [auth C] | 2.60.40.2580 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) | |
D | 2.60.40.2580 | Mainly Beta | Sandwich | Immunoglobulin-like | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
B [auth C], D | PF06321 | Major fimbrial subunit protein (FimA) (P_gingi_FimA) | Major fimbrial subunit protein (FimA) | This family consists of several Porphyromonas gingivalis major fimbrial subunit protein (FimA) sequences. Fimbriae of Porphyromonas gingivalis, a periodontopathogen, play an important role in its adhesion to and invasion of host cells. The fimA genes ... | Domain |
B [auth C], D | PF22358 | Minor fimbrium tip subunit MfA4, C-terminal (MfA4_C) | Minor fimbrium tip subunit MfA4, C-terminal | This domain is found at the C-terminal end of Minor fimbrium tip subunit MfA4 from Porphyromonas gingivalis and similar sequences mainly found in bacteroidales. MfA4 is involved in biofilm formation, adhesion onto host cells and onto other bacteria t ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
---|---|---|---|---|
A, C [auth B] | Immunoreactive 32 kDa antigen | - | - | |
B [auth C], D | Immunoreactive 32 kDa antigen | - | - |