5EZL | pdb_00005ezl

Crystal Structure of Fab of parasite invasion inhibitory antibody c1 - monoclinic form

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
D [auth L]d5ezll1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Bd5ezlb1 All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin automated matches automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
C [auth H]d5ezlh_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)
Ad5ezla_ All beta proteins Immunoglobulin-like beta-sandwich Immunoglobulin V set domains (antibody variable domain-like) automated matches mouse (Mus musculus ) [TaxId: 10090 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
D [auth L]V-sete5ezlL1 A: a/b three-layered sandwichesX: Small envelope protein MH: Small envelope protein MT: Small envelope protein MF: V-setECOD (v294.1)
BV-sete5ezlB1 A: a/b three-layered sandwichesX: Small envelope protein MH: Small envelope protein MT: Small envelope protein MF: V-setECOD (v294.1)
C [auth H]V-sete5ezlH1 A: a/b three-layered sandwichesX: Small envelope protein MH: Small envelope protein MT: Small envelope protein MF: V-setECOD (v294.1)
APeptidase_M60e5ezlA1 A: a/b three-layered sandwichesX: Immunoglobulin-like beta-sandwichH: Immunoglobulin-relatedT: Immunoglobulin/Fibronectin type III/E set domains/PapD-likeF: Peptidase_M60ECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D [auth L]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
B2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
C [auth H]2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)
A2.60.40.10 Mainly Beta Sandwich Immunoglobulin-like ImmunoglobulinsCATH (4.3.0)

IMGT Antibody Annotation IMGT Database Homepage

ChainProtein NameDescriptionOrganism NameGene Allele Name(s)Domain Name(s)Receptor TypeReceptor DescriptionProvenance Source
B,
D [auth L]		Fab c12 L-KAPPA Mus musculus (house mouse) IGKV6-32*01, IGKJ1*01, IGKJ2*01, IGKC*01, IGKC*02 V-DOMAIN V-KAPPA, C-DOMAIN C-KAPPA IG FAB-GAMMA-2A_KAPPA IMGT (202614-0)
A,
C [auth H]		Fab c12 VH-CH1 Mus musculus (house mouse) IGHV4-2*02, IGHJ4*01, IGHG2A*01, IGHG2A*02 V-DOMAIN VH, C-DOMAIN CH1 IG FAB-GAMMA-2A_KAPPA IMGT (202614-0)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B,
D [auth L]		Light ChainIGKV6 Kappa-SAbDab (2026-04-17)
A,
C [auth H]		Heavy ChainIGHV4 --SAbDab (2026-04-17)