5FOE
Crystal structure of the C. elegans Protein O-fucosyltransferase 2 (CePOFUT2) double mutant (R298K-R299K) in complex with GDP and the human TSR1 from thrombospondin 1
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | O-FucT_C | e5foeA2 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: O-FucT_C | ECOD (1.6) |
A | O-FucT_N | e5foeA1 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: O-FucT_N | ECOD (1.6) |
A | TSP_1 | e5foeA3 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1 | ECOD (1.6) |
B | O-FucT_C | e5foeB1 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: O-FucT_C | ECOD (1.6) |
B | O-FucT_N | e5foeB2 | A: a/b three-layered sandwiches | X: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | H: UDP-Glycosyltransferase/glycogen phosphorylase (From Topology) | T: UDP-Glycosyltransferase/glycogen phosphorylase | F: O-FucT_N | ECOD (1.6) |
B | TSP_1 | e5foeB3 | A: few secondary structure elements | X: TSP-1 type 1 repeat (From Topology) | H: TSP-1 type 1 repeat (From Topology) | T: TSP-1 type 1 repeat | F: TSP_1 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00090 | Thrombospondin type 1 domain (TSP_1) | Thrombospondin type 1 domain | - | Domain | |
PF10250 | GDP-fucose protein O-fucosyltransferase (O-FucT) | GDP-fucose protein O-fucosyltransferase | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR019378 | GDP-fucose protein O-fucosyltransferase | Family | |
IPR045130 | GDP-fucose protein O-fucosyltransferase 2-like | Family | |
IPR000884 | Thrombospondin type-1 (TSP1) repeat | Repeat | |
IPR036383 | Thrombospondin type-1 (TSP1) repeat superfamily | Homologous Superfamily | |
IPR003367 | Thrombospondin, type 3-like repeat | Repeat | |
IPR001881 | EGF-like calcium-binding domain | Domain | |
IPR028974 | TSP type-3 repeat | Homologous Superfamily | |
IPR000742 | EGF-like domain | Domain | |
IPR024731 | EGF domain | Domain | |
IPR017897 | Thrombospondin, type 3 repeat | Repeat | |
IPR013320 | Concanavalin A-like lectin/glucanase domain superfamily | Homologous Superfamily | |
IPR048287 | Thrombospondin-like, N-terminal domain | Domain | |
IPR008859 | Thrombospondin, C-terminal | Domain | |
IPR001007 | VWFC domain | Domain |