5IB8 | pdb_00005ib8

Structure of T. thermophilus 70S ribosome complex with mRNA, tRNAfMet and near-cognate tRNALys with U-G mismatch in the A-site

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
I [auth 8E]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
LB [auth 82]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8037678 3000100 SCOP2B (2022-06-29)
JB [auth 62]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
G [auth 6E]SCOP2B SuperfamilyRibosomal protein S7 8033523 3000799 SCOP2B (2022-06-29)
DD [auth M5]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
CB [auth Q8]SCOP2B SuperfamilyL35p-like 8033192 3000790 SCOP2B (2022-06-29)
AB [auth N8]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
BD [auth J5]SCOP2B SuperfamilyZn-binding ribosomal proteins 8033190 3001320 SCOP2B (2022-06-29)
ZA [auth M8]SCOP2B SuperfamilyL28p-like 8033189 3001966 SCOP2B (2022-06-29)
XA [auth K8]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
ZC [auth G5]SCOP2B SuperfamilyRibosomal protein L29 (L29p) 8042933 3000713 SCOP2B (2022-06-29)
E [auth 4E]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
E [auth 4E]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
HB [auth 42]SCOP2B SuperfamilydsRNA-binding domain-like 8044017 3000985 SCOP2B (2022-06-29)
HB [auth 42]SCOP2B SuperfamilyRibosomal protein S5 domain 2-like 8044015 3000100 SCOP2B (2022-06-29)
YC [auth F5]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
WA [auth J8]SCOP2B SuperfamilyL28p-like 8042932 3001966 SCOP2B (2022-06-29)
XC [auth E5]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
VA [auth I8]SCOP2B SuperfamilyRibosomal L27 protein-like 8041210 3000539 SCOP2B (2022-06-29)
TA [auth G8]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
VC [auth C5]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033223 3000334 SCOP2B (2022-06-29)
UC [auth B5]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
SA [auth F8]SCOP2B SuperfamilyRibosomal proteins S24e, L23 and L15e 8033219 3000210 SCOP2B (2022-06-29)
RA [auth E8]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
TC [auth A5]SCOP2B SuperfamilyRibosomal protein L22 8033220 3001078 SCOP2B (2022-06-29)
QA [auth D8]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
SC [auth 95]SCOP2B Superfamilyl21p-like 8033218 3002005 SCOP2B (2022-06-29)
RC [auth 85]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
PA [auth C8]SCOP2B SuperfamilyRibosomal protein L20 8033216 3000563 SCOP2B (2022-06-29)
QC [auth 75]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
OA [auth B8]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033214 3000334 SCOP2B (2022-06-29)
NA [auth A8]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
PC [auth 65]SCOP2B SuperfamilyTranslational machinery components 8033211 3000571 SCOP2B (2022-06-29)
GB [auth 32]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
D [auth 3E]SCOP2B SuperfamilyAlpha-L RNA-binding motif 8044014 3001473 SCOP2B (2022-06-29)
MA [auth 98]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
OC [auth 55]SCOP2B SuperfamilyProkaryotic ribosomal protein L17 8032744 3000995 SCOP2B (2022-06-29)
NC [auth 45]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
LA [auth 88]SCOP2B SuperfamilyRibosomal protein L16p/L10e 8043627 3000884 SCOP2B (2022-06-29)
KA [auth 78]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
MC [auth 35]SCOP2B SuperfamilyRibosomal proteins L15p and L18e 8033207 3001045 SCOP2B (2022-06-29)
LC [auth 25]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
JA [auth 68]SCOP2B Superfamily50S Ribosomal protein L14-like 8042936 3000433 SCOP2B (2022-06-29)
IA [auth 58]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
KC [auth 15]SCOP2B SuperfamilyRibosomal protein L13 8033205 3001134 SCOP2B (2022-06-29)
HA [auth 61]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
HA [auth 61]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
JC [auth 69]SCOP2B SuperfamilyRibosomal protein L9 C-domain 8042934 3000329 SCOP2B (2022-06-29)
JC [auth 69]SCOP2B SuperfamilyL9 N-domain-like 8042935 3000338 SCOP2B (2022-06-29)
IC [auth 59]SCOP2B SuperfamilyRibosomal protein L6 8033202 3000724 SCOP2B (2022-06-29)
IC [auth 59]SCOP2B SuperfamilyRibosomal protein L6 8033203 3000724 SCOP2B (2022-06-29)
GA [auth 51]SCOP2B SuperfamilyRibosomal protein L6 8033202 3000724 SCOP2B (2022-06-29)
GA [auth 51]SCOP2B SuperfamilyRibosomal protein L6 8033203 3000724 SCOP2B (2022-06-29)
EA [auth 31]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
GC [auth 39]SCOP2B SuperfamilyRibosomal protein L4 8033198 3001146 SCOP2B (2022-06-29)
FC [auth 29]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
DA [auth 21]SCOP2B SuperfamilyTranslational proteins 8033197 3000811 SCOP2B (2022-06-29)
FB [auth 22]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
FB [auth 22]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
C [auth 2E]SCOP2B SuperfamilyProkaryotic type KH domain (KH-domain type II) 8044011 3001043 SCOP2B (2022-06-29)
C [auth 2E]SCOP2B SuperfamilyRibosomal protein S3 C-terminal domain 8044012 3001053 SCOP2B (2022-06-29)
CA [auth 11]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
CA [auth 11]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
EC [auth 19]SCOP2B SuperfamilyNucleic acid-binding proteins 8033195 3000135 SCOP2B (2022-06-29)
EC [auth 19]SCOP2B SuperfamilyTranslation proteins SH3-like KOW motif containing domain 8033194 3000334 SCOP2B (2022-06-29)
WB [auth BA]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
T [auth BI]SCOP2B SuperfamilyRibosomal protein S20 8044029 3001362 SCOP2B (2022-06-29)
EB [auth 12]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
B [auth 1E]SCOP2B SuperfamilySIS domain/Ribosomal protein S2-like 8044010 3001397 SCOP2B (2022-06-29)
S [auth AI]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
VB [auth AA]SCOP2B SuperfamilyRibosomal protein S19 8044027 3000686 SCOP2B (2022-06-29)
UB [auth 9A]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
R [auth 9I]SCOP2B SuperfamilyRibosomal protein S18 8044028 3001191 SCOP2B (2022-06-29)
TB [auth 8A]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
Q [auth 8I]SCOP2B SuperfamilyNucleic acid-binding proteins 8044026 3000135 SCOP2B (2022-06-29)
SB [auth 7A]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
P [auth 7I]SCOP2B SuperfamilyRibosomal protein S16 8044025 3000680 SCOP2B (2022-06-29)
N [auth 5I]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
QB [auth 5A]SCOP2B SuperfamilyGlucocorticoid receptor-like (DNA-binding domain) 8052585 3000068 SCOP2B (2022-06-29)
M [auth 4I]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
PB [auth 4A]SCOP2B SuperfamilyS13-like H2TH domain 8003708 3000053 SCOP2B (2022-06-29)
OB [auth 3A]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
L [auth 3I]SCOP2B SuperfamilyNucleic acid-binding proteins 8044021 3000135 SCOP2B (2022-06-29)
NB [auth 2A]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
K [auth 2I]SCOP2B SuperfamilyTranslational machinery components 8044020 3000571 SCOP2B (2022-06-29)
MB [auth 1A]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)
J [auth 1I]SCOP2B SuperfamilyRibosomal protein S10 8044019 3001336 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth 8E]AhpC-TSAe5ib88E1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
LB [auth 82]AhpC-TSAe5ib8821 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
KB [auth 72]AhpC-TSAe5ib8721 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
H [auth 7E]AhpC-TSAe5ib87E1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
JB [auth 62]AhpC-TSAe5ib8621 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
G [auth 6E]AhpC-TSAe5ib86E1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
F [auth 5E]AhpC-TSAe5ib85E1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
IB [auth 52]AhpC-TSAe5ib8521 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
DD [auth M5]AhpC-TSAe5ib8M51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
CB [auth Q8]AhpC-TSAe5ib8Q81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
BB [auth P8]AhpC-TSAe5ib8P81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
CD [auth L5]AhpC-TSAe5ib8L51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
AB [auth N8]AhpC-TSAe5ib8N81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
BD [auth J5]AhpC-TSAe5ib8J51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
ZA [auth M8]AhpC-TSAe5ib8M81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
AD [auth H5]AhpC-TSAe5ib8H51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
YA [auth L8]AhpC-TSAe5ib8L81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
XA [auth K8]AhpC-TSAe5ib8K81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
ZC [auth G5]AhpC-TSAe5ib8G51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
E [auth 4E]AhpC-TSAe5ib84E1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
HB [auth 42]AhpC-TSAe5ib8421 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
YC [auth F5]AhpC-TSAe5ib8F51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
WA [auth J8]AhpC-TSAe5ib8J81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
XC [auth E5]AhpC-TSAe5ib8E51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
VA [auth I8]AhpC-TSAe5ib8I81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
WC [auth D5]AhpC-TSAe5ib8D51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
UA [auth H8]Gtf3_Ce5ib8H81 A: alpha bundlesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Gtf3_CECOD (develop294)
TA [auth G8]AhpC-TSAe5ib8G81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
VC [auth C5]AhpC-TSAe5ib8C51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
UC [auth B5]AhpC-TSAe5ib8B51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
SA [auth F8]AhpC-TSAe5ib8F81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
RA [auth E8]AhpC-TSAe5ib8E81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
TC [auth A5]AhpC-TSAe5ib8A51 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
QA [auth D8]AhpC-TSAe5ib8D81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
SC [auth 95]AhpC-TSAe5ib8951 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
RC [auth 85]AhpC-TSAe5ib8851 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
PA [auth C8]AhpC-TSAe5ib8C81 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
QC [auth 75]Peptidase_C78e5ib8751 A: alpha bundlesX: MocoBD/DmpA-relatedH: ferredoxin-like domain in periplasmic region of MacBT: ferredoxin-like domain in periplasmic region of MacBF: Peptidase_C78ECOD (develop294)
OA [auth B8]Peptidase_C78e5ib8B81 A: alpha bundlesX: MocoBD/DmpA-relatedH: ferredoxin-like domain in periplasmic region of MacBT: ferredoxin-like domain in periplasmic region of MacBF: Peptidase_C78ECOD (develop294)
NA [auth A8]PemK_toxine5ib8A81 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
PC [auth 65]PemK_toxine5ib8651 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
GB [auth 32]AhpC-TSAe5ib8321 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
D [auth 3E]AhpC-TSAe5ib83E1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
MA [auth 98]AhpC-TSAe5ib8981 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
OC [auth 55]AhpC-TSAe5ib8551 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
NC [auth 45]PemK_toxine5ib8451 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
LA [auth 88]PemK_toxine5ib8881 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
KA [auth 78]PemK_toxine5ib8781 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
MC [auth 35]PemK_toxine5ib8351 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
LC [auth 25]AhpC-TSAe5ib8251 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
JA [auth 68]AhpC-TSAe5ib8681 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
IA [auth 58]AhpC-TSAe5ib8581 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
KC [auth 15]AhpC-TSAe5ib8151 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
HA [auth 61]AhpC-TSAe5ib8611 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
JC [auth 69]AhpC-TSAe5ib8691 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
IC [auth 59]AhpC-TSAe5ib8591 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
GA [auth 51]AhpC-TSAe5ib8511 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
FA [auth 41]AhpC-TSAe5ib8411 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
HC [auth 49]AhpC-TSAe5ib8491 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
EA [auth 31]AhpC-TSAe5ib8311 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
GC [auth 39]AhpC-TSAe5ib8391 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
FC [auth 29]PemK_toxine5ib8291 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
DA [auth 21]PemK_toxine5ib8211 A: alpha bundlesX: SH3H: SH3T: SH3F: PemK_toxinECOD (develop294)
FB [auth 22]Gtf3_Ce5ib8221 A: alpha bundlesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Gtf3_CECOD (develop294)
C [auth 2E]Gtf3_Ce5ib82E1 A: alpha bundlesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Gtf3_CECOD (develop294)
CA [auth 11]AhpC-TSAe5ib8111 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
EC [auth 19]AhpC-TSAe5ib8191 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
BA [auth 71]Gtf3_Ce5ib8711 A: alpha bundlesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Gtf3_CECOD (develop294)
WB [auth BA]AhpC-TSAe5ib8BA1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
T [auth BI]AhpC-TSAe5ib8BI1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
EB [auth 12]Gtf3_Ce5ib8121 A: alpha bundlesX: omega toxin-likeH: omega toxin-relatedT: omega toxin-relatedF: Gtf3_CECOD (develop294)
B [auth 1E]AhpC-TSAe5ib81E1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
S [auth AI]AhpC-TSAe5ib8AI1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
VB [auth AA]AhpC-TSAe5ib8AA1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
UB [auth 9A]AhpC-TSAe5ib89A1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
R [auth 9I]AhpC-TSAe5ib89I1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
TB [auth 8A]AhpC-TSAe5ib88A1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
Q [auth 8I]AhpC-TSAe5ib88I1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
SB [auth 7A]AhpC-TSAe5ib87A1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
P [auth 7I]AhpC-TSAe5ib87I1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
RB [auth 6A]AhpC-TSAe5ib86A1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
O [auth 6I]AhpC-TSAe5ib86I1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
N [auth 5I]AhpC-TSAe5ib85I1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
QB [auth 5A]AhpC-TSAe5ib85A1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
M [auth 4I]AhpC-TSAe5ib84I1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
PB [auth 4A]AhpC-TSAe5ib84A1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
OB [auth 3A]AhpC-TSAe5ib83A1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
L [auth 3I]AhpC-TSAe5ib83I1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
NB [auth 2A]AhpC-TSAe5ib82A1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
K [auth 2I]AhpC-TSAe5ib82I1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
MB [auth 1A]AhpC-TSAe5ib81A1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)
J [auth 1I]AhpC-TSAe5ib81I1 A: alpha bundlesX: Chlorophyll a-b binding proteinH: Chlorophyll a-b binding proteinT: Chlorophyll a-b binding proteinF: AhpC-TSAECOD (develop294)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
I [auth 8E],
LB [auth 82]		PF00380Ribosomal protein S9/S16 (Ribosomal_S9)Ribosomal protein S9/S16- Family
H [auth 7E],
KB [auth 72]		PF00410Ribosomal protein S8 (Ribosomal_S8)Ribosomal protein S8Domain
G [auth 6E],
JB [auth 62]		PF00177Ribosomal protein S7p/S5e (Ribosomal_S7)Ribosomal protein S7p/S5eThis family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. Domain
F [auth 5E],
IB [auth 52]		PF01250Ribosomal protein S6 (Ribosomal_S6)Ribosomal protein S6Domain
CB [auth Q8],
DD [auth M5]		PF01632Ribosomal protein L35 (Ribosomal_L35p)Ribosomal protein L35- Family
BB [auth P8],
CD [auth L5]		PF00468Ribosomal protein L34 (Ribosomal_L34)Ribosomal protein L34- Family
AB [auth N8],
BD [auth J5]		PF01783Ribosomal L32p protein family (Ribosomal_L32p)Ribosomal L32p protein family- Family
ZA [auth M8]PF01197Ribosomal protein L31 (Ribosomal_L31)Ribosomal protein L31- Family
AD [auth H5],
YA [auth L8]		PF00327Ribosomal protein L30p/L7e (Ribosomal_L30)Ribosomal protein L30p/L7eThis family includes prokaryotic L30 and eukaryotic L7. Domain
XA [auth K8],
ZC [auth G5]		PF00831Ribosomal L29 protein (Ribosomal_L29)Ribosomal L29 protein- Family
E [auth 4E],
HB [auth 42]		PF03719Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C)Ribosomal protein S5, C-terminal domainDomain
E [auth 4E],
HB [auth 42]		PF00333Ribosomal protein S5, N-terminal domain (Ribosomal_S5)Ribosomal protein S5, N-terminal domainDomain
WA [auth J8],
YC [auth F5]		PF00830Ribosomal L28 family (Ribosomal_L28)Ribosomal L28 family- Family
UA [auth H8],
WC [auth D5]		PF14693Ribosomal protein TL5, C-terminal domain (Ribosomal_TL5_C)Ribosomal protein TL5, C-terminal domainThis family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC pr ...This family contains the C-terminal domain of ribosomal protein TL5. The N-terminal domain, which binds to 5S rRNA, is contained in family Ribosomal_L25p, Pfam:PF01386. Full length (N- and C-terminal domain) homologues of TL5 are also known as CTC proteins. TL5 or CTC are not found in Eukarya or Archaea. In some Bacteria, including E. coli, this ribosomal subunit occurs as a single domain protein (named Ribosomal subunit L25), where the only domain is homologous to TL5 N-terminal domain (hence included in family Pfam:PF01386). The function of the C-terminal domain of TLC is at present unknown.
Domain
UA [auth H8],
WC [auth D5]		PF01386Ribosomal L25p family (Ribosomal_L25p)Ribosomal L25p familyRibosomal protein L25 is an RNA binding protein, that binds 5S rRNA. This family includes Ctc from B. subtilis Swiss:P14194, which is induced by stress. Domain
TA [auth G8],
VC [auth C5]		PF17136Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24)Large ribosomal subunit protein uL24, C-terminal domainThis entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ...This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 makes very minor contributions to the biogenesis structure, and function of 60s ribosomal subunits [1]. However, RPL24 is essential to generate the first intermediate during 50s ribosomal subunits assembly [2]. RPL26 have an extra-ribosomal function to enhances p53 translation after DNA damage [3].
Domain
TA [auth G8],
VC [auth C5]		PF00467KOW motif (KOW)KOW motif- Family
SA [auth F8],
UC [auth B5]		PF00276Ribosomal protein L23 (Ribosomal_L23)Ribosomal protein L23- Family
RA [auth E8],
TC [auth A5]		PF00237Ribosomal protein L22p/L17e (Ribosomal_L22)Ribosomal protein L22p/L17eThis family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. Domain
QA [auth D8],
SC [auth 95]		PF00829Ribosomal prokaryotic L21 protein (Ribosomal_L21p)Ribosomal prokaryotic L21 protein- Family
PA [auth C8],
RC [auth 85]		PF00453Ribosomal protein L20 (Ribosomal_L20)Ribosomal protein L20- Family
OA [auth B8],
QC [auth 75]		PF01245Ribosomal protein L19 (Ribosomal_L19)Ribosomal protein L19- Family
D [auth 3E],
GB [auth 32]		PF00163Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4)Ribosomal protein S4/S9 N-terminal domain- Family
D [auth 3E],
GB [auth 32]		PF01479S4 domain (S4)S4 domainThe S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ...The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast protein containing a pseudouridine synthetase and a deaminase domain, bacterial tyrosyl-tRNA synthetases, and a number of uncharacterized, small proteins that may be involved in translation regulation [1]. The S4 domain probably mediates binding to RNA.
Domain
MA [auth 98],
OC [auth 55]		PF01196Ribosomal protein L17 (Ribosomal_L17)Ribosomal protein L17- Family
LA [auth 88],
NC [auth 45]		PF00252Ribosomal protein L16p/L10e (Ribosomal_L16)Ribosomal protein L16p/L10eDomain
KA [auth 78],
MC [auth 35]		PF00828Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A)Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27AThis family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. Domain
JA [auth 68],
LC [auth 25]		PF00238Ribosomal protein L14p/L23e (Ribosomal_L14)Ribosomal protein L14p/L23eDomain
IA [auth 58],
KC [auth 15]		PF00572Ribosomal protein L13 (Ribosomal_L13)Ribosomal protein L13- Family
HA [auth 61],
JC [auth 69]		PF01281Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N)Ribosomal protein L9, N-terminal domainDomain
HA [auth 61],
JC [auth 69]		PF03948Ribosomal protein L9, C-terminal domain (Ribosomal_L9_C)Ribosomal protein L9, C-terminal domainDomain
GA [auth 51],
IC [auth 59]		PF00347Ribosomal protein L6 (Ribosomal_L6)Ribosomal protein L6Domain
FA [auth 41],
HC [auth 49]		PF00281Ribosomal protein L5 (Ribosomal_L5)Ribosomal protein L5Domain
FA [auth 41],
HC [auth 49]		PF00673ribosomal L5P family C-terminus (Ribosomal_L5_C)ribosomal L5P family C-terminusThis region is found associated with Pfam:PF00281. Domain
EA [auth 31],
GC [auth 39]		PF00573Ribosomal protein L4/L1 family (Ribosomal_L4)Ribosomal protein L4/L1 family- Family
DA [auth 21],
FC [auth 29]		PF00297Ribosomal protein L3 (Ribosomal_L3)Ribosomal protein L3- Family
C [auth 2E],
FB [auth 22]		PF07650KH domain (KH_2)KH domainDomain
C [auth 2E],
FB [auth 22]		PF00189Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C)Ribosomal protein S3, C-terminal domainThis family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. Domain
CA [auth 11],
EC [auth 19]		PF03947Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C)Ribosomal Proteins L2, C-terminal domainDomain
CA [auth 11],
EC [auth 19]		PF00181Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N)Ribosomal Proteins L2, RNA binding N-terminal domainDomain
B [auth 1E],
EB [auth 12]		PF00318Ribosomal protein S2 (Ribosomal_S2)Ribosomal protein S2- Family
S [auth AI],
VB [auth AA]		PF00203Ribosomal protein S19 (Ribosomal_S19)Ribosomal protein S19Domain
R [auth 9I],
UB [auth 9A]		PF01084Ribosomal protein S18 (Ribosomal_S18)Ribosomal protein S18- Family
Q [auth 8I],
TB [auth 8A]		PF00366Ribosomal protein S17 (Ribosomal_S17)Ribosomal protein S17Domain
P [auth 7I],
SB [auth 7A]		PF00886Ribosomal protein S16 (Ribosomal_S16)Ribosomal protein S16- Family
O [auth 6I],
RB [auth 6A]		PF00312Ribosomal protein S15 (Ribosomal_S15)Ribosomal protein S15Domain
N [auth 5I],
QB [auth 5A]		PF00253Ribosomal protein S14p/S29e (Ribosomal_S14)Ribosomal protein S14p/S29e- Family
M [auth 4I],
PB [auth 4A]		PF00416Ribosomal protein S13/S18 (Ribosomal_S13)Ribosomal protein S13/S18- Family
L [auth 3I],
OB [auth 3A]		PF00164Ribosomal protein S12/S23 (Ribosom_S12_S23)Ribosomal protein S12/S23This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. Domain
K [auth 2I],
NB [auth 2A]		PF00411Ribosomal protein S11 (Ribosomal_S11)Ribosomal protein S11- Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
I [auth 8E],
LB [auth 82]		30S ribosomal protein S9
H [auth 7E],
KB [auth 72]		30S ribosomal protein S8
G [auth 6E],
JB [auth 62]		30S ribosomal protein S7
F [auth 5E],
IB [auth 52]		30S ribosomal protein S6
YB [auth 1L]tRNALys---
CB [auth Q8],
DD [auth M5]		50S ribosomal protein L35
BB [auth P8],
CD [auth L5]		50S ribosomal protein L34
AB [auth N8],
BD [auth J5]		50S ribosomal protein L32
ZA [auth M8]50S ribosomal protein L31
AD [auth H5],
YA [auth L8]		50S ribosomal protein L30
XA [auth K8],
ZC [auth G5]		50S ribosomal protein L29
E [auth 4E],
HB [auth 42]		30S ribosomal protein S5
WA [auth J8],
YC [auth F5]		50S ribosomal protein L28
VA [auth I8],
XC [auth E5]		50S ribosomal protein L27
UA [auth H8],
WC [auth D5]		50S ribosomal protein L25
TA [auth G8],
VC [auth C5]		50S ribosomal protein L24
SA [auth F8],
UC [auth B5]		50S ribosomal protein L23
RA [auth E8],
TC [auth A5]		50S ribosomal protein L22
QA [auth D8],
SC [auth 95]		50S ribosomal protein L21
PA [auth C8],
RC [auth 85]		50S ribosomal protein L20
OA [auth B8],
QC [auth 75]		50S ribosomal protein L19
NA [auth A8],
PC [auth 65]		50S ribosomal protein L18
D [auth 3E],
GB [auth 32]		30S ribosomal protein S4
MA [auth 98],
OC [auth 55]		50S ribosomal protein L17
LA [auth 88],
NC [auth 45]		50S ribosomal protein L16
KA [auth 78],
MC [auth 35]		50S ribosomal protein L15
JA [auth 68],
LC [auth 25]		50S ribosomal protein L14
IA [auth 58],
KC [auth 15]		50S ribosomal protein L13
HA [auth 61],
JC [auth 69]		50S ribosomal protein L9
GA [auth 51],
IC [auth 59]		50S ribosomal protein L6
FA [auth 41],
HC [auth 49]		50S ribosomal protein L5
EA [auth 31],
GC [auth 39]		50S ribosomal protein L4
DA [auth 21],
FC [auth 29]		50S ribosomal protein L3
C [auth 2E],
FB [auth 22]		30S ribosomal protein S3
CA [auth 11],
EC [auth 19]		50S ribosomal protein L2
BA [auth 71]50S ribosomal protein L1
AA [auth 16],
DC [auth 1J]		5S ribosomal RNA---
CC [auth 14],
Z [auth 1H]		23S ribosomal RNA---
BC [auth 4L],
Y [auth 4K]		mRNA---
AC [auth 3L],
X [auth 3K]		tRNALys---
W [auth 2K],
ZB [auth 2L]		tRNAfMet---
V [auth 1K]tRNALys---
U [auth 1F],
XB [auth 1B]		30S ribosomal protein Thx -
T [auth BI],
WB [auth BA]		30S ribosomal protein S20
B [auth 1E],
EB [auth 12]		30S ribosomal protein S2
S [auth AI],
VB [auth AA]		30S ribosomal protein S19
R [auth 9I],
UB [auth 9A]		30S ribosomal protein S18
Q [auth 8I],
TB [auth 8A]		30S ribosomal protein S17
P [auth 7I],
SB [auth 7A]		30S ribosomal protein S16
O [auth 6I],
RB [auth 6A]		30S ribosomal protein S15
N [auth 5I],
QB [auth 5A]		30S ribosomal protein S14 type Z
M [auth 4I],
PB [auth 4A]		30S ribosomal protein S13
L [auth 3I],
OB [auth 3A]		30S ribosomal protein S12
K [auth 2I],
NB [auth 2A]		30S ribosomal protein S11
J [auth 1I],
MB [auth 1A]		30S ribosomal protein S10
A [auth 13],
DB [auth 1G]		16S ribosomal RNA---

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
I [auth 8E],
LB [auth 82]		IPR020574Small ribosomal subunit protein uS9, conserved siteConserved Site
I [auth 8E],
LB [auth 82]		IPR023035Small ribosomal subunit protein uS9, bacteria/plastidFamily
I [auth 8E],
LB [auth 82]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
I [auth 8E],
LB [auth 82]		IPR000754Small ribosomal subunit protein uS9Family
I [auth 8E],
LB [auth 82]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
H [auth 7E],
KB [auth 72]		IPR000630Small ribosomal subunit protein uS8Family
H [auth 7E],
KB [auth 72]		IPR047863Small ribosomal subunit protein uS8, conserved siteConserved Site
H [auth 7E],
KB [auth 72]		IPR035987Small ribosomal subunit protein uS8 superfamilyHomologous Superfamily
G [auth 6E],
JB [auth 62]		IPR020606Small ribosomal subunit protein uS7, conserved siteConserved Site
G [auth 6E],
JB [auth 62]		IPR000235Small ribosomal subunit protein uS7Family
G [auth 6E],
JB [auth 62]		IPR005717Small ribosomal subunit protein uS7, bacteria/organellaFamily
G [auth 6E],
JB [auth 62]		IPR036823Small ribosomal subunit protein uS7 domain superfamilyHomologous Superfamily
G [auth 6E],
JB [auth 62]		IPR023798Small ribosomal subunit protein uS7 domainDomain
F [auth 5E],
IB [auth 52]		IPR020815Small ribosomal subunit protein bS6, conserved siteConserved Site
F [auth 5E],
IB [auth 52]		IPR000529Small ribosomal subunit protein bS6Family
F [auth 5E],
IB [auth 52]		IPR020814Small ribosomal subunit protein bS6, plastid/chloroplastFamily
F [auth 5E],
IB [auth 52]		IPR035980Small ribosomal subunit protein bS6 superfamilyHomologous Superfamily
F [auth 5E],
IB [auth 52]		IPR014717Translation elongation factor EF1B/small ribosomal subunit protein bS6Homologous Superfamily
CB [auth Q8],
DD [auth M5]		IPR021137Large ribosomal subunit protein bL35-likeFamily
CB [auth Q8],
DD [auth M5]		IPR018265Large ribosomal subunit protein bL35, conserved siteConserved Site
CB [auth Q8],
DD [auth M5]		IPR001706Large ribosomal subunit protein bL35Family
CB [auth Q8],
DD [auth M5]		IPR037229Large ribosomal subunit protein bL35 superfamilyHomologous Superfamily
BB [auth P8],
CD [auth L5]		IPR020939Large ribosomal subunit protein bL34, conserved siteConserved Site
BB [auth P8],
CD [auth L5]		IPR000271Large ribosomal subunit protein bL34Family
AB [auth N8],
BD [auth J5]		IPR002677Large ribosomal subunit protein bL32Family
AB [auth N8],
BD [auth J5]		IPR011332Zinc-binding ribosomal proteinHomologous Superfamily
AB [auth N8],
BD [auth J5]		IPR044957Large ribosomal subunit protein bL32, bacteriaFamily
ZA [auth M8]IPR002150Large ribosomal subunit protein bL31 type A/BFamily
ZA [auth M8]IPR027491Large ribosomal subunit protein bL31 type AFamily
ZA [auth M8]IPR042105Large ribosomal subunit protein bL31 superfamilyHomologous Superfamily
ZA [auth M8]IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
AD [auth H5],
YA [auth L8]		IPR036919Large ribosomal subunit protein uL30, ferredoxin-like fold domain superfamilyHomologous Superfamily
AD [auth H5],
YA [auth L8]		IPR005996Large ribosomal subunit protein uL30, bacteriaFamily
AD [auth H5],
YA [auth L8]		IPR016082Large ribosomal subunit protein uL30-like, ferredoxin-like fold domainDomain
AD [auth H5],
YA [auth L8]		IPR018038Large ribosomal subunit protein uL30, conserved siteConserved Site
XA [auth K8],
ZC [auth G5]		IPR050063Universal ribosomal protein uL29Family
XA [auth K8],
ZC [auth G5]		IPR001854Large ribosomal subunit protein uL29Family
XA [auth K8],
ZC [auth G5]		IPR036049Large ribosomal subunit protein uL29 superfamilyHomologous Superfamily
XA [auth K8],
ZC [auth G5]		IPR018254Large ribosomal subunit protein uL29, conserved siteConserved Site
E [auth 4E],
HB [auth 42]		IPR005712Small ribosomal subunit protein uS5, bacteriaFamily
E [auth 4E],
HB [auth 42]		IPR000851Small ribosomal subunit protein uS5Family
E [auth 4E],
HB [auth 42]		IPR005324Small ribosomal subunit protein uS5, C-terminalDomain
E [auth 4E],
HB [auth 42]		IPR013810Small ribosomal subunit protein uS5, N-terminalDomain
E [auth 4E],
HB [auth 42]		IPR020568Ribosomal protein uS5 domain 2-type superfamilyHomologous Superfamily
E [auth 4E],
HB [auth 42]		IPR018192Small ribosomal subunit protein uS5, N-terminal, conserved siteConserved Site
E [auth 4E],
HB [auth 42]		IPR014721Small ribosomal subunit protein uS5 domain 2-type fold, subgroupHomologous Superfamily
WA [auth J8],
YC [auth F5]		IPR050096Bacterial ribosomal protein bL28Family
WA [auth J8],
YC [auth F5]		IPR001383Large ribosomal subunit protein bL28, bacteriaFamily
WA [auth J8],
YC [auth F5]		IPR026569Large ribosomal subunit protein bL28Family
WA [auth J8],
YC [auth F5]		IPR034704Large ribosomal subunit protein bL28/bL31-like superfamilyHomologous Superfamily
VA [auth I8],
XC [auth E5]		IPR001684Large ribosomal subunit protein bL27Family
VA [auth I8],
XC [auth E5]		IPR018261Large ribosomal subunit protein bL27, conserved siteConserved Site
UA [auth H8],
WC [auth D5]		IPR011035Large ribosomal subunit protein bL25/Gln-tRNA synthetase, anti-codon-binding domain superfamilyHomologous Superfamily
UA [auth H8],
WC [auth D5]		IPR001021Ribosomal protein bL25, long-formFamily
UA [auth H8],
WC [auth D5]		IPR029751Large ribosomal subunit protein bL25, L25 domainDomain
UA [auth H8],
WC [auth D5]		IPR037121Large ribosomal subunit protein bL25, C-terminalHomologous Superfamily
UA [auth H8],
WC [auth D5]		IPR020057Large ribosomal subunit protein bL25, beta domainDomain
UA [auth H8],
WC [auth D5]		IPR020056Large ribosomal subunit protein bL25/Gln-tRNA synthetase, N-terminalHomologous Superfamily
UA [auth H8],
WC [auth D5]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
TA [auth G8],
VC [auth C5]		IPR057264Large ribosomal subunit protein uL24, C-terminal domainDomain
TA [auth G8],
VC [auth C5]		IPR003256Large ribosomal subunit protein uL24Family
TA [auth G8],
VC [auth C5]		IPR041988Large ribosomal subunit protein uL24, KOW domainDomain
TA [auth G8],
VC [auth C5]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
TA [auth G8],
VC [auth C5]		IPR005824KOWDomain
TA [auth G8],
VC [auth C5]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
TA [auth G8],
VC [auth C5]		IPR005825Large ribosomal subunit protein uL24, conserved siteConserved Site
SA [auth F8],
UC [auth B5]		IPR012678Ribosomal protein uL23/eL15/eS24 core domain superfamilyHomologous Superfamily
SA [auth F8],
UC [auth B5]		IPR012677Nucleotide-binding alpha-beta plait domain superfamilyHomologous Superfamily
SA [auth F8],
UC [auth B5]		IPR013025Large ribosomal subunit protein uL23-likeFamily
RA [auth E8],
TC [auth A5]		IPR018260Large ribosomal subunit protein uL22, conserved siteConserved Site
RA [auth E8],
TC [auth A5]		IPR036394Ribosomal protein uL22 superfamilyHomologous Superfamily
RA [auth E8],
TC [auth A5]		IPR001063Large ribosomal subunit protein uL22Family
RA [auth E8],
TC [auth A5]		IPR005727Large ribosomal subunit protein uL22, bacterial/chloroplast-typeFamily
RA [auth E8],
TC [auth A5]		IPR047867Large ribosomal subunit protein uL22, bacteria/organellaFamily
QA [auth D8],
SC [auth 95]		IPR028909Large ribosomal subunit protein bL21-likeFamily
QA [auth D8],
SC [auth 95]		IPR001787Large ribosomal subunit protein bL21Family
QA [auth D8],
SC [auth 95]		IPR036164Large ribosomal subunit protein bL21-like superfamilyHomologous Superfamily
PA [auth C8],
RC [auth 85]		IPR049946Large ribosomal subunit protein bL20, conserved siteConserved Site
PA [auth C8],
RC [auth 85]		IPR035566Ribosomal protein bL20, C-terminalHomologous Superfamily
PA [auth C8],
RC [auth 85]		IPR005813Large ribosomal subunit protein bL20Family
OA [auth B8],
QC [auth 75]		IPR001857Large ribosomal subunit protein bL19Family
OA [auth B8],
QC [auth 75]		IPR038657Large ribosomal subunit protein bL19 superfamilyHomologous Superfamily
OA [auth B8],
QC [auth 75]		IPR018257Large ribosomal subunit protein bL19, conserved siteConserved Site
OA [auth B8],
QC [auth 75]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
NA [auth A8],
PC [auth 65]		IPR005484Large ribosomal subunit protein uL18, bacterial/plantae/animaliaFamily
NA [auth A8],
PC [auth 65]		IPR057268Large ribosomal subunit protein uL18Family
NA [auth A8],
PC [auth 65]		IPR004389Large ribosomal subunit protein uL18, bacteriaFamily
D [auth 3E],
GB [auth 32]		IPR018079Small ribosomal subunit protein uS4, conserved siteConserved Site
D [auth 3E],
GB [auth 32]		IPR002942RNA-binding S4 domainDomain
D [auth 3E],
GB [auth 32]		IPR001912Small ribosomal subunit protein uS4, N-terminalDomain
D [auth 3E],
GB [auth 32]		IPR036986RNA-binding S4 domain superfamilyHomologous Superfamily
D [auth 3E],
GB [auth 32]		IPR022801Small ribosomal subunit protein uS4Family
D [auth 3E],
GB [auth 32]		IPR005709Small ribosomal subunit protein uS4, bacteriaFamily
MA [auth 98],
OC [auth 55]		IPR036373Large ribosomal subunit protein bL17 superfamilyHomologous Superfamily
MA [auth 98],
OC [auth 55]		IPR000456Large ribosomal subunit protein bL17Family
LA [auth 88],
NC [auth 45]		IPR000114Large ribosomal subunit protein uL16, bacteriaFamily
LA [auth 88],
NC [auth 45]		IPR036920Large ribosomal subunit protein uL16 superfamilyHomologous Superfamily
LA [auth 88],
NC [auth 45]		IPR016180Large ribosomal subunit protein uL16 domainDomain
LA [auth 88],
NC [auth 45]		IPR047873Large ribosomal subunit protein uL16Family
KA [auth 78],
MC [auth 35]		IPR021131Large ribosomal subunit protein uL15/eL18Domain
KA [auth 78],
MC [auth 35]		IPR030878Large ribosomal subunit protein uL15Family
KA [auth 78],
MC [auth 35]		IPR001196Large ribosomal subunit protein uL15, conserved siteConserved Site
KA [auth 78],
MC [auth 35]		IPR036227Large ribosomal subunit protein uL15/eL18 superfamilyHomologous Superfamily
KA [auth 78],
MC [auth 35]		IPR005749Large ribosomal subunit protein uL15, bacteriaFamily
JA [auth 68],
LC [auth 25]		IPR036853Large ribosomal subunit protein uL14 superfamilyHomologous Superfamily
JA [auth 68],
LC [auth 25]		IPR000218Large ribosomal subunit protein uL14Family
JA [auth 68],
LC [auth 25]		IPR019972Large ribosomal subunit protein uL14, conserved siteConserved Site
JA [auth 68],
LC [auth 25]		IPR005745Large ribosomal subunit protein uL14, bacteriaFamily
IA [auth 58],
KC [auth 15]		IPR023563Large ribosomal subunit protein uL13, conserved siteConserved Site
IA [auth 58],
KC [auth 15]		IPR005822Large ribosomal subunit protein uL13Family
IA [auth 58],
KC [auth 15]		IPR005823Large ribosomal subunit protein uL13, bacteriaFamily
IA [auth 58],
KC [auth 15]		IPR036899Large ribosomal subunit protein uL13 superfamilyHomologous Superfamily
HA [auth 61],
JC [auth 69]		IPR009027Large ribosomal subunit protein bL9/RNase H1, N-terminalHomologous Superfamily
HA [auth 61],
JC [auth 69]		IPR020594Large ribosomal subunit protein bL9, bacteria/chloroplastFamily
HA [auth 61],
JC [auth 69]		IPR036935Large ribosomal subunit protein bL9, N-terminal domain superfamilyHomologous Superfamily
HA [auth 61],
JC [auth 69]		IPR036791Large ribosomal subunit protein bL9, C-terminal domain superfamilyHomologous Superfamily
HA [auth 61],
JC [auth 69]		IPR020069Large ribosomal subunit protein bL9, C-terminalDomain
HA [auth 61],
JC [auth 69]		IPR020070Large ribosomal subunit protein bL9, N-terminalDomain
HA [auth 61],
JC [auth 69]		IPR000244Large ribosomal subunit protein bL9Family
GA [auth 51],
IC [auth 59]		IPR020040Large ribosomal subunit protein uL6, alpha-beta domainDomain
GA [auth 51],
IC [auth 59]		IPR036789Large ribosomal subunit protein uL6-like, alpha-beta domain superfamilyHomologous Superfamily
GA [auth 51],
IC [auth 59]		IPR000702Large ribosomal subunit protein uL6-likeFamily
GA [auth 51],
IC [auth 59]		IPR019906Large ribosomal subunit protein uL6, bacteriaFamily
FA [auth 41],
HC [auth 49]		IPR020929Large ribosomal subunit protein uL5, conserved siteConserved Site
FA [auth 41],
HC [auth 49]		IPR022803Large ribosomal subunit protein uL5 domain superfamilyHomologous Superfamily
FA [auth 41],
HC [auth 49]		IPR031309Large ribosomal subunit protein uL5, C-terminalDomain
FA [auth 41],
HC [auth 49]		IPR031310Large ribosomal subunit protein uL5, N-terminalDomain
FA [auth 41],
HC [auth 49]		IPR002132Large ribosomal subunit protein uL5Family
FA [auth 41],
HC [auth 49]		IPR020930Large ribosomal subunit protein uL5, bacteriaFamily
EA [auth 31],
GC [auth 39]		IPR013005Large ribosomal subunit protein uL4-likeFamily
EA [auth 31],
GC [auth 39]		IPR002136Large ribosomal subunit protein uL4Family
EA [auth 31],
GC [auth 39]		IPR023574Large ribosomal subunit protein uL4 domain superfamilyHomologous Superfamily
DA [auth 21],
FC [auth 29]		IPR019926Large ribosomal subunit protein uL3, conserved siteConserved Site
DA [auth 21],
FC [auth 29]		IPR019927Large ribosomal subunit protein uL3, bacteria/organellaFamily
DA [auth 21],
FC [auth 29]		IPR009000Translation protein, beta-barrel domain superfamilyHomologous Superfamily
DA [auth 21],
FC [auth 29]		IPR000597Large ribosomal subunit protein uL3Family
C [auth 2E],
FB [auth 22]		IPR005704Small ribosomal subunit protein uS3, bacteriaFamily
C [auth 2E],
FB [auth 22]		IPR001351Small ribosomal subunit protein uS3, C-terminalDomain
C [auth 2E],
FB [auth 22]		IPR057258Small ribosomal subunit protein uS3Family
C [auth 2E],
FB [auth 22]		IPR009019K homology domain superfamily, prokaryotic typeHomologous Superfamily
C [auth 2E],
FB [auth 22]		IPR004087K Homology domainDomain
C [auth 2E],
FB [auth 22]		IPR004044K Homology domain, type 2Domain
C [auth 2E],
FB [auth 22]		IPR015946K homology domain-like, alpha/betaHomologous Superfamily
C [auth 2E],
FB [auth 22]		IPR036419Ribosomal protein S3, C-terminal domain superfamilyHomologous Superfamily
C [auth 2E],
FB [auth 22]		IPR018280Small ribosomal subunit protein uS3, conserved siteConserved Site
CA [auth 11],
EC [auth 19]		IPR005880Large ribosomal subunit protein uL2, bacteria/organellaFamily
CA [auth 11],
EC [auth 19]		IPR022669Large ribosomal subunit protein uL2, C-terminalDomain
CA [auth 11],
EC [auth 19]		IPR014722Large ribosomal subunit protein uL2, domain 2Homologous Superfamily
CA [auth 11],
EC [auth 19]		IPR008991Translation protein SH3-like domain superfamilyHomologous Superfamily
CA [auth 11],
EC [auth 19]		IPR022671Large ribosomal subunit protein uL2, conserved siteConserved Site
CA [auth 11],
EC [auth 19]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
CA [auth 11],
EC [auth 19]		IPR022666Large ribosomal subunit protein uL2, RNA-binding domainDomain
CA [auth 11],
EC [auth 19]		IPR014726Large ribosomal subunit protein uL2, domain 3Homologous Superfamily
CA [auth 11],
EC [auth 19]		IPR002171Large ribosomal subunit protein uL2Family
BA [auth 71]IPR023673Large ribosomal subunit protein uL1, conserved siteConserved Site
BA [auth 71]IPR005878Large ribosomal subunit protein uL1, bacteriaFamily
BA [auth 71]IPR016095Large ribosomal subunit protein uL1, 3-layer alpha/beta-sandwich domainHomologous Superfamily
BA [auth 71]IPR023674Ribosomal protein uL1-likeHomologous Superfamily
BA [auth 71]IPR002143Large ribosomal subunit protein uL1Family
BA [auth 71]IPR028364Ribosomal protein uL1/ribosomal biogenesis proteinFamily
U [auth 1F],
XB [auth 1B]		IPR030826Small ribosomal subunit protein bTHX/bTHXc/bTHXmFamily
U [auth 1F],
XB [auth 1B]		IPR031414Small ribosomal subunit protein bTHXFamily
T [auth BI],
WB [auth BA]		IPR036510Small ribosomal subunit protein bS20 superfamilyHomologous Superfamily
T [auth BI],
WB [auth BA]		IPR002583Small ribosomal subunit protein bS20Family
B [auth 1E],
EB [auth 12]		IPR005706Small ribosomal subunit protein uS2, bacteria/mitochondria/plastidFamily
B [auth 1E],
EB [auth 12]		IPR023591Small ribosomal subunit protein uS2, flavodoxin-like domain superfamilyHomologous Superfamily
B [auth 1E],
EB [auth 12]		IPR018130Small ribosomal subunit protein uS2, conserved siteConserved Site
B [auth 1E],
EB [auth 12]		IPR001865Small ribosomal subunit protein uS2Family
S [auth AI],
VB [auth AA]		IPR005732Small ribosomal subunit protein uS19, bacteriaFamily
S [auth AI],
VB [auth AA]		IPR002222Small ribosomal subunit protein uS19Family
S [auth AI],
VB [auth AA]		IPR023575Small ribosomal subunit protein uS19, superfamilyHomologous Superfamily
S [auth AI],
VB [auth AA]		IPR020934Small ribosomal subunit protein uS19, conserved siteConserved Site
R [auth 9I],
UB [auth 9A]		IPR001648Small ribosomal subunit protein bS18Family
R [auth 9I],
UB [auth 9A]		IPR018275Small ribosomal subunit protein bS18, conserved siteConserved Site
R [auth 9I],
UB [auth 9A]		IPR036870Small ribosomal subunit protein bS18 superfamilyHomologous Superfamily
Q [auth 8I],
TB [auth 8A]		IPR019984Small ribosomal subunit protein uS17, bacteria/chloroplastFamily
Q [auth 8I],
TB [auth 8A]		IPR019979Small ribosomal subunit protein uS17, conserved siteConserved Site
Q [auth 8I],
TB [auth 8A]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
Q [auth 8I],
TB [auth 8A]		IPR000266Small ribosomal subunit protein uS17Family
P [auth 7I],
SB [auth 7A]		IPR023803Small ribosomal subunit protein bS16 domain superfamilyHomologous Superfamily
P [auth 7I],
SB [auth 7A]		IPR000307Small ribosomal subunit protein bS16Family
O [auth 6I],
RB [auth 6A]		IPR005290Small ribosomal subunit protein uS15, bacteriaFamily
O [auth 6I],
RB [auth 6A]		IPR009068uS15/NS1, RNA-binding domain superfamilyHomologous Superfamily
O [auth 6I],
RB [auth 6A]		IPR000589Small ribosomal subunit protein uS15Family
N [auth 5I],
QB [auth 5A]		IPR023053Small ribosomal subunit protein uS14, bacteriaFamily
N [auth 5I],
QB [auth 5A]		IPR001209Small ribosomal subunit protein uS14Family
N [auth 5I],
QB [auth 5A]		IPR018271Small ribosomal subunit protein uS14, conserved siteConserved Site
N [auth 5I],
QB [auth 5A]		IPR043140Small ribosomal subunit protein uS14 superfamilyHomologous Superfamily
M [auth 4I],
PB [auth 4A]		IPR027437Small ribosomal subunit protein uS13, C-terminalHomologous Superfamily
M [auth 4I],
PB [auth 4A]		IPR001892Small ribosomal subunit protein uS13Family
M [auth 4I],
PB [auth 4A]		IPR018269Small ribosomal subunit protein uS13, conserved siteConserved Site
M [auth 4I],
PB [auth 4A]		IPR010979Small ribosomal subunit protein uS13-like, H2THHomologous Superfamily
M [auth 4I],
PB [auth 4A]		IPR019980Small ribosomal subunit protein uS13, bacteriaFamily
L [auth 3I],
OB [auth 3A]		IPR006032Small ribosomal subunit protein uS12Family
L [auth 3I],
OB [auth 3A]		IPR005679Ribosomal protein uS12, bacteriaFamily
L [auth 3I],
OB [auth 3A]		IPR012340Nucleic acid-binding, OB-foldHomologous Superfamily
K [auth 2I],
NB [auth 2A]		IPR001971Small ribosomal subunit protein uS11Family
K [auth 2I],
NB [auth 2A]		IPR036967Small ribosomal subunit protein uS11 superfamilyHomologous Superfamily
K [auth 2I],
NB [auth 2A]		IPR019981Small ribosomal subunit protein uS11, bacteriaFamily
K [auth 2I],
NB [auth 2A]		IPR018102Small ribosomal subunit protein uS11, conserved siteConserved Site
J [auth 1I],
MB [auth 1A]		IPR001848Small ribosomal subunit protein uS10Family
J [auth 1I],
MB [auth 1A]		IPR027486Small ribosomal subunit protein uS10 domainDomain
J [auth 1I],
MB [auth 1A]		IPR036838Small ribosomal subunit protein uS10 domain superfamilyHomologous Superfamily
J [auth 1I],
MB [auth 1A]		IPR018268Small ribosomal subunit protein uS10, conserved siteConserved Site