5IR6
The structure of bd oxidase from Geobacillus thermodenitrificans
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
C | MRAP_like | e5ir6C1 | A: extended segments | X: Bd-type quinol oxidase transmembrane helix subunit (From Topology) | H: Bd-type quinol oxidase transmembrane helix subunit (From Topology) | T: Bd-type quinol oxidase transmembrane helix subunit | F: MRAP_like | ECOD (1.6) |
A | Cyt_bd_oxida_I_1st | e5ir6A2 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: Cyt_bd_oxida_I_1st | ECOD (1.6) |
A | Cyt_bd_oxida_I_2nd | e5ir6A1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: Cyt_bd_oxida_I_2nd | ECOD (1.6) |
B | Cyt_bd_oxida_II_1st | e5ir6B1 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: Cyt_bd_oxida_II_1st | ECOD (1.6) |
B | Cyt_bd_oxida_II_2nd | e5ir6B2 | A: alpha bundles | X: Transmembrane heme-binding four-helical bundle (From Homology) | H: Transmembrane heme-binding four-helical bundle | T: Transmembrane di-heme cytochromes | F: Cyt_bd_oxida_II_2nd | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01654 | Cytochrome bd terminal oxidase subunit I (Cyt_bd_oxida_I) | Cytochrome bd terminal oxidase subunit I | - | Family | |
PF02322 | Cytochrome bd terminal oxidase subunit II (Cyt_bd_oxida_II) | Cytochrome bd terminal oxidase subunit II | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR002585 | Cytochrome ubiquinol oxidase subunit 1 | Family | |
IPR003317 | Cytochrome ubiquinol oxidase subunit 2 | Family |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |