Annotations: 5LP3

Three tetrameric rings of Isoaspartyl Dipeptidase fitted in an EM volume.

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
L	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
L	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
K	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
J	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
I	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
H	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
G	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
F	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
E [auth A]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
E [auth A]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
E [auth A]	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
D [auth E]	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
D [auth E]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
D [auth E]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
C [auth D]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
B [auth C]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
A [auth B]	SCOP2B Superfamily	Metallo-dependent hydrolases	8034168	3000428	SCOP2B (2022-06-29)
A [auth B]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)
A [auth B]	SCOP2B Superfamily	Composite domain of metallo-dependent hydrolases	8034166	3000176	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
L	e5lp3L1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
K	e5lp3K1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
J	e5lp3J1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
I	e5lp3I1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
H	e5lp3H1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
G	e5lp3G1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
F	e5lp3F1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
E [auth A]	e5lp3A1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
D [auth E]	e5lp3E1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
C [auth D]	e5lp3D1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
B [auth C]	e5lp3C1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)
A [auth B]	e5lp3B1	A: alpha arrays	X: Carbon-nitrogen hydrolase-like	H: Carbon-nitrogen hydrolase	T: Carbon-nitrogen hydrolase	F:	ECOD (v295.2)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	PF01979	Amidohydrolase family (Amidohydro_1)	Amidohydrolase family	This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ...	This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisation as a purine and also as a nitrogen source [2]. This family also includes dihydroorotase and N-acetylglucosamine-6-phosphate deacetylases, EC:3.5.1.25 These enzymes catalyse the reaction N-acetyl-D-glucosamine 6-phosphate + H2O <=> D-glucosamine 6-phosphate + acetate. This family includes the catalytic domain of urease alpha subunit [3]. Dihydroorotases (EC:3.5.2.3) are also included [4-5].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	Isoaspartyl dipeptidase	hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds peptidase activity omega peptidase activity catalytic activity, acting on a protein threonine-type peptidase activity beta-aspartyl-peptidase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding hydrolase activity catalytic activity hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds peptidase activity omega peptidase activity catalytic activity, acting on a protein threonine-type peptidase activity beta-aspartyl-peptidase activity cation binding transition metal ion binding zinc ion binding ion binding binding metal ion binding small molecule binding identical protein binding protein binding	-	cellular anatomical structure intracellular anatomical structure cytoplasm cytosol

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR033826	Isoaspartyl-dipeptidase	Family
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR050378	Metallo-dependent Hydrolases Superfamily	Family
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR006680	Amidohydrolase-related	Domain
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR011059	Metal-dependent hydrolase, composite domain superfamily	Homologous Superfamily
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR032466	Metal-dependent hydrolase	Homologous Superfamily
A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], A [auth B], B [auth C], C [auth D], D [auth E], E [auth A], F, G, H, I, J, K, L	IPR010229	Peptidase M38, beta-aspartyl dipeptidase	Family