5MKV
Crystal Structure of Human Dihydropyrimidinease-like 2 (DPYSL2A)/Collapsin Response Mediator Protein (CRMP2) residues 13-516
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | D-HYD_C | e5mkvA1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: D-HYD_C | ECOD (1.6) |
A | DHOase | e5mkvA2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHOase | ECOD (1.6) |
B | D-HYD_C | e5mkvB2 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: D-HYD_C | ECOD (1.6) |
B | DHOase | e5mkvB1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHOase | ECOD (1.6) |
C | D-HYD_C | e5mkvC2 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: D-HYD_C | ECOD (1.6) |
C | DHOase | e5mkvC1 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHOase | ECOD (1.6) |
D | D-HYD_C | e5mkvD1 | A: beta sandwiches | X: Composite domain of metallo-dependent hydrolases (From Topology) | H: Composite domain of metallo-dependent hydrolases (From Topology) | T: Composite domain of metallo-dependent hydrolases | F: D-HYD_C | ECOD (1.6) |
D | DHOase | e5mkvD2 | A: a/b barrels | X: TIM beta/alpha-barrel | H: TIM barrels (From Topology) | T: TIM barrels | F: DHOase | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
---|---|---|---|---|---|---|
A | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
A | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
B | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
B | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
C | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
C | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
D | 2.30.40.10 | Mainly Beta | Roll | Urease, subunit C | domain 1 | CATH (4.3.0) |
D | 3.20.20.140 | Alpha Beta | Alpha-Beta Barrel | TIM Barrel | Metal-dependent hydrolases | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF01979 | Amidohydrolase family (Amidohydro_1) | Amidohydrolase family | This family of enzymes are a a large metal dependent hydrolase superfamily [1]. The family includes Adenine deaminase EC:3.5.4.2 that hydrolyses adenine to form hypoxanthine and ammonia. Adenine deaminases reaction is important for adenine utilisatio ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR006680 | Amidohydrolase-related | Domain | |
IPR011059 | Metal-dependent hydrolase, composite domain superfamily | Homologous Superfamily | |
IPR032466 | Metal-dependent hydrolase | Homologous Superfamily | |
IPR050378 | Metallo-dependent Hydrolases Superfamily | Family | |
IPR011778 | Hydantoinase/dihydropyrimidinase | Family |