YnDL in Complex with 5 amino acid (PGA) complex
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | DapB_N | e5onjA1 | A: alpha arrays | X: Major facilitator superfamily (MFS) general substrate transporter | H: Major facilitator superfamily (MFS) general substrate transporter | T: Major facilitator superfamily (MFS) general substrate transporter | F: DapB_N | ECOD (v295) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF05908 | Poly-gamma-glutamate hydrolase (Gamma_PGA_hydro) | Poly-gamma-glutamate hydrolase | This family consists of a number of bacterial and phage proteins that function as gamma-PGA hydrolase enzymes [1]. Structurally the protein in this family adopted an open alpha/beta mixed core structure with a seven-stranded parallel/anti-parallel be ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| B [auth D] | (2R,3S,4R,5R,6R)-6-((1R,2R,3S,4R,6S)-4,6-DIAMINO-2,3-DIHYDROXYCYCLOHEXYLOXY)-5-AMINO-2-(AMINOMETHYL)-TETRAHYDRO-2H-PYRAN-3,4-DIOL | - | - | - |
| YndL | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR038128 | Poly-gamma-glutamate hydrolase, zinc-binding motif superfamily | Homologous Superfamily | |
| IPR008585 | Poly-gamma-glutamate hydrolase | Family |














