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 5V1Q | pdb_00005v1q

Crystal structure of Streptococcus suis SuiB

External Resource: Annotation


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
BSCOP2B SuperfamilyWinged helix DNA-binding domain 8106660 3000034 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyRadical SAM enzymes 8106658 3000308 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyRadical SAM enzymes 8106658 3000308 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyWinged helix DNA-binding domain 8106660 3000034 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
BRadical_SAM,SPASMe5v1qB1 A: alpha arraysX: Ribosomal protein S5 domain 2-likeH: ARM repeatT: ARM repeatF: Radical_SAM,SPASMECOD (v295.2)
ATudor_2e5v1qA1 A: alpha arraysX: P-loop domains-likeH: Cas7-relatedT: CRISPR-associated protein Cas7f/Csy3F: Tudor_2ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
B3.20.20.70 Alpha Beta Alpha-Beta Barrel TIM Barrel Aldolase class ICATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B
Radical SAM - -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B
IPR007197Radical SAMDomain
A, B
IPR024017Petide cyclisation enzyme, radical SAMFamily
A, B
IPR0238854Fe4S-binding SPASM domainDomain
A, B
IPR058240Radical SAM superfamilyHomologous Superfamily
A, B
IPR006638Elp3/MiaA/NifB-like, radical SAM core domainDomain
A, B
IPR050377Radical SAM PqqA peptide cyclase/Mycofactocin maturase MftC-likeFamily
A, B
IPR013785Aldolase-type TIM barrelHomologous Superfamily