5YBL | pdb_00005ybl

Fe(II)/(alpha)ketoglutarate-dependent dioxygenase AusE

External Resource: Annotation


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
De5yblD1 A: P-loop domains-likeX: Cas7-relatedH: CRISPR-associated protein Cas7f/Csy3T: ATP-synt_VA_CF:ECOD (20:10:01)
Ce5yblC1 A: P-loop domains-likeX: Cas7-relatedH: CRISPR-associated protein Cas7f/Csy3T: ATP-synt_VA_CF:ECOD (20:10:01)
Be5yblB1 A: Cryptochrome/photolyase FAD-binding domain-relatedX: Cryptochrome/photolyase FAD-binding domain-relatedH: PriXT: PkinaseF:ECOD (20:10:01)
Ae5yblA1 A: P-loop domains-likeX: Cas7-relatedH: CRISPR-associated protein Cas7f/Csy3T: ATP-synt_VA_CF:ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
D2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (utative)
C2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (utative)
B2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (utative)
A2.60.120.620 Mainly Beta Sandwich Jelly Rolls q2cbj1_9rhob like domainCATH (utative)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A, B, C, D
PF05721Phytanoyl-CoA dioxygenase (PhyH) (PhyH)Phytanoyl-CoA dioxygenase (PhyH)This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficie ...This family is made up of several eukaryotic phytanoyl-CoA dioxygenase (PhyH) proteins, ectoine hydroxylases and a number of bacterial deoxygenases. PhyH is a peroxisomal enzyme catalysing the first step of phytanic acid alpha-oxidation. PhyH deficiency causes Refsum's disease (RD) which is an inherited neurological syndrome biochemically characterised by the accumulation of phytanic acid in plasma and tissues [1].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A, B, C, D
Multifunctional dioxygenase ausE -

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A, B, C, D
IPR008775Phytanoyl-CoA dioxygenase-likeFamily