5ZLP | pdb_00005zlp

Crystal structure of glutamine synthetase from helicobacter pylori

External Resource: Annotation


Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

ChainsDomain InfoClassFoldSuperfamilyFamilyDomainSpeciesProvenance Source (Version)
I [auth K]d5zlpk1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
I [auth K]d5zlpk2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
L [auth I]d5zlpi1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
L [auth I]d5zlpi2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
K [auth G]d5zlpg1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
K [auth G]d5zlpg2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
J [auth L]d5zlpl1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
J [auth L]d5zlpl2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
H [auth J]d5zlpj1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
H [auth J]d5zlpj2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
G [auth H]d5zlph1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
G [auth H]d5zlph2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Fd5zlpf1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Fd5zlpf2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Ed5zlpe1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Ed5zlpe2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Dd5zlpd1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Dd5zlpd2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Cd5zlpc1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Cd5zlpc2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Bd5zlpb1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Bd5zlpb2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Ad5zlpa1 Alpha and beta proteins (a+b) beta-Grasp (ubiquitin-like) Glutamine synthetase, N-terminal domain automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)
Ad5zlpa2 Alpha and beta proteins (a+b) Glutamine synthetase/guanido kinase Glutamine synthetase/guanido kinase automated matches automated matches Campylobacter pylori (Helicobacter pylori 26695 ) [TaxId: 85962 ], SCOPe (2.08)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
I [auth K]Collar,S_tail_recep_bde5zlpK1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
L [auth I]Collar,S_tail_recep_bde5zlpI1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
K [auth G]Collar,S_tail_recep_bde5zlpG1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
J [auth L]Collar,S_tail_recep_bde5zlpL1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
H [auth J]DapB_Ne5zlpJ1 A: alpha arraysX: Major facilitator superfamily (MFS) general substrate transporterH: Major facilitator superfamily (MFS) general substrate transporterT: Major facilitator superfamily (MFS) general substrate transporterF: DapB_NECOD (v295)
G [auth H]Collar,S_tail_recep_bde5zlpH1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
FCollar,S_tail_recep_bde5zlpF1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
ECollar,S_tail_recep_bde5zlpE1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
DCollar,S_tail_recep_bde5zlpD1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
CCollar,S_tail_recep_bde5zlpC1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
BCollar,S_tail_recep_bde5zlpB1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)
ACollar,S_tail_recep_bde5zlpA1 A: alpha arraysX: Surp module (SWAP domain)H: gp11/gp12 receptor-binding domainT: gp11/gp12 receptor-binding domainF: Collar,S_tail_recep_bdECOD (v295)

Domain Annotation: CATH CATH Database Homepage

ChainDomainClassArchitectureTopologyHomologyProvenance Source (Version)
I [auth K]3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
I [auth K]3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
L [auth I]3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
L [auth I]3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
K [auth G]3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
K [auth G]3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
J [auth L]3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
J [auth L]3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
H [auth J]3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
H [auth J]3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
G [auth H]3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
G [auth H]3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
F3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
F3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
E3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
E3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
D3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
D3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
C3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
C3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
B3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
B3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)
A3.10.20.70 Alpha Beta Roll Ubiquitin-like (UB roll) Glutamine synthetase, N-terminal domainCATH (4.3.0)
A3.30.590.10 Alpha Beta 2-Layer Sandwich Creatine Kinase Chain A, domain 2CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
A,
B,
C,
D,
E,
PF00120Glutamine synthetase, catalytic domain (Gln-synt_C)Glutamine synthetase, catalytic domainDomain
A,
B,
C,
D,
E,
PF03951Glutamine synthetase, beta-Grasp domain (Gln-synt_N)Glutamine synthetase, beta-Grasp domainGlutamine synthetase (GS) plays an essential role in the metabolism of nitrogen by catalysing the condensation of glutamate and ammonia to form glutamine. This entry represents the glutamine synthetase N-terminal domain, which contributes to the subs ...Glutamine synthetase (GS) plays an essential role in the metabolism of nitrogen by catalysing the condensation of glutamate and ammonia to form glutamine. This entry represents the glutamine synthetase N-terminal domain, which contributes to the substrate binding pocket of the enzyme [1,2].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
A,
B,
C,
D,
E,
Glutamine synthetase

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
A,
B,
C,
D,
E,
IPR004809Glutamine synthetase type IFamily
A,
B,
C,
D,
E,
IPR008146Glutamine synthetase, catalytic domainDomain
A,
B,
C,
D,
E,
IPR027303Glutamine synthetase, glycine-rich siteConserved Site
A,
B,
C,
D,
E,
IPR014746Glutamine synthetase/guanido kinase, catalytic domainHomologous Superfamily
A,
B,
C,
D,
E,
IPR008147Glutamine synthetase, N-terminal domainDomain
A,
B,
C,
D,
E,
IPR036651Glutamine synthetase, N-terminal domain superfamilyHomologous Superfamily