6AYE
Human apo-TRPML3 channel at pH 7.4
External Resource: Annotation
- Domain Annotation: ECOD Classification
- Protein Family Annotation
- Gene Ontology: Gene Product Annotation
- InterPro: Protein Family Classification
- Pharos: Disease Associations
- Membrane Protein Annotation: OPM
- Membrane Protein Annotation: PDBTM
- Membrane Protein Annotation: MemProtMD
- Membrane Protein Annotation: mpstruc
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | UNK_F_TYPE | e6ayeA1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: UNK_F_TYPE | ECOD (1.6) |
A | KOG3733 | e6ayeA2 | A: a+b two layers | X: Polycystin-mucolipin domain (From Topology) | H: Polycystin-mucolipin domain (From Topology) | T: Polycystin-mucolipin domain | F: KOG3733 | ECOD (1.6) |
B | UNK_F_TYPE | e6ayeB1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: UNK_F_TYPE | ECOD (1.6) |
B | KOG3733 | e6ayeB2 | A: a+b two layers | X: Polycystin-mucolipin domain (From Topology) | H: Polycystin-mucolipin domain (From Topology) | T: Polycystin-mucolipin domain | F: KOG3733 | ECOD (1.6) |
C | UNK_F_TYPE | e6ayeC2 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: UNK_F_TYPE | ECOD (1.6) |
C | KOG3733 | e6ayeC1 | A: a+b two layers | X: Polycystin-mucolipin domain (From Topology) | H: Polycystin-mucolipin domain (From Topology) | T: Polycystin-mucolipin domain | F: KOG3733 | ECOD (1.6) |
D | UNK_F_TYPE | e6ayeD1 | A: alpha complex topology | X: Voltage-gated ion channels (From Topology) | H: Voltage-gated ion channels (From Topology) | T: Voltage-gated ion channels | F: UNK_F_TYPE | ECOD (1.6) |
D | KOG3733 | e6ayeD2 | A: a+b two layers | X: Polycystin-mucolipin domain (From Topology) | H: Polycystin-mucolipin domain (From Topology) | T: Polycystin-mucolipin domain | F: KOG3733 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF08016 | Polycystin cation channel (PKD_channel) | Polycystin cation channel | - | Family | |
PF21381 | Mucolipin, extracytosolic domain (MCLN_ECD) | Mucolipin, extracytosolic domain | Mucolipins 1-3 are ion channel proteins that belong to the transient receptor potential (TRP) superfamily of cation channels and are the major Ca2+-permeable channels on late endosomes and lysosomes (LEL). This entry represents the extracytosolic dom ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Pharos: Disease Associations Pharos Homepage Annotation
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Ion channel (VIC) superfamily | Polycystin cation channel |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Channels: Transient Receptor Potential (TRP) | TRPML3 ion channel, apo protein at pH 7.4 |