Annotations: 6C66

CRISPR RNA-guided surveillance complex, pre-nicking

External Resource: Annotation

Domain Annotation: ECOD Classification
Domain Annotation: CATH
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
O	Cytochrom_C	e6c66O1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Cytochrom_C	ECOD (v295)
M	Cytochrom_C	e6c66M1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Cytochrom_C	ECOD (v295)
K	Y_phosphatase	e6c66K1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Y_phosphatase	ECOD (v295)
I	Cytochrom_C	e6c66I1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Cytochrom_C	ECOD (v295)
H	Cytochrom_C	e6c66H1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Cytochrom_C	ECOD (v295)
G [auth F]	Y_phosphatase	e6c66F1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Y_phosphatase	ECOD (v295)
F [auth E]	Y_phosphatase	e6c66E1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Y_phosphatase	ECOD (v295)
E [auth D]	Y_phosphatase	e6c66D1	A: alpha arrays	X: Surp module (SWAP domain)	H: gp11/gp12 receptor-binding domain	T: gp11/gp12 receptor-binding domain	F: Y_phosphatase	ECOD (v295)
D [auth C]	Cytochrom_C	e6c66C1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Cytochrom_C	ECOD (v295)
C [auth B]	Cytochrom_C	e6c66B1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Cytochrom_C	ECOD (v295)
B [auth A]	Cytochrom_C	e6c66A1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Cytochrom_C	ECOD (v295)
A [auth G]	Cytochrom_C	e6c66G1	A: alpha arrays	X: Major facilitator superfamily (MFS) general substrate transporter	H: Major facilitator superfamily (MFS) general substrate transporter	T: Major facilitator superfamily (MFS) general substrate transporter	F: Cytochrom_C	ECOD (v295)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
A [auth G]	1.10.3210.30	Mainly Alpha	Orthogonal Bundle	Hypothetical protein af1432		CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
O	CRISPR-associated protein, Cse3 family	-	-	-
N	Nontarget strand	-	-	-
M	CRISPR-associated protein, Cas5e family	RNA binding binding nucleic acid binding	biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus maintenance of CRISPR repeat elements chromosome organization primary metabolic process DNA metabolic process biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus maintenance of CRISPR repeat elements chromosome organization primary metabolic process DNA metabolic process maintenance of DNA repeat elements nucleic acid metabolic process cellular component organization nucleobase-containing compound metabolic process organelle organization cellular process metabolic process cellular component organization or biogenesis macromolecule metabolic process	-
L	Target strand	-	-	-
J	crRNA	-	-	-
I, K	Uncharacterized protein	identical protein binding protein binding binding	-	-
C [auth B], D [auth C], E [auth D], F [auth E], G [auth F], C [auth B], D [auth C], E [auth D], F [auth E], G [auth F], H	CRISPR-associated protein, Cse4 family	-	-	-
B [auth A]	CRISPR-associated protein, Cse1 family	-	-	-
A [auth G]	CRISPR-associated helicase, Cas3 family	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding nuclease activity catalytic activity, acting on a nucleic acid catalytic activity hydrolase activity nucleic acid conformation isomerase activity isomerase activity catalytic activity, acting on RNA helicase activity RNA helicase activity ATP-dependent activity, acting on RNA macromolecular conformation isomerase activity ATP-dependent activity RNA binding nucleic acid binding cation binding metal ion binding	biological process involved in interspecies interaction between organisms defense response to virus response to stimulus defense response response to other organism response to stress response to external stimulus response to external biotic stimulus response to virus response to biotic stimulus	-

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
O	IPR010179	CRISPR-associated protein Cse3	Family
M	IPR010147	CRISPR-associated protein, CasD	Family
M	IPR021124	CRISPR-associated protein, Cas5	Family
M	IPR013422	CRISPR-associated protein Cas5, N-terminal	Domain
I, K	IPR013382	CRISPR-associated protein Cse2	Family
I, K	IPR038287	Cse2 superfamily	Homologous Superfamily
C [auth B], D [auth C], E [auth D], F [auth E], G [auth F], C [auth B], D [auth C], E [auth D], F [auth E], G [auth F], H	IPR010148	CRISPR-associated protein, CT1975	Family
B [auth A]	IPR013381	CRISPR-associated protein Cse1	Family
A [auth G]	IPR001650	Helicase, C-terminal domain-like	Domain
A [auth G]	IPR038257	CRISPR-associated Cas3-type HD domain superfamily	Homologous Superfamily
A [auth G]	IPR054712	CRISPR-associated nuclease/helicase Cas3 domain	Domain
A [auth G]	IPR006474	Helicase Cas3, CRISPR-associated, core	Domain
A [auth G]	IPR050547	DEAD box ATP-dependent RNA helicases	Family
A [auth G]	IPR006483	CRISPR-associated Cas3-type, HD domain	Domain
A [auth G]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.

6C66 | pdb_00006c66

CRISPR RNA-guided surveillance complex, pre-nicking

External Resource: Annotation

Domain Annotation: ECOD Classification ECOD Database Homepage

Domain Annotation: CATH CATH Database Homepage

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage