6CM3 | pdb_00006cm3

BG505 SOSIP in complex with sCD4, 17b, 8ANC195


Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

ChainsTypeFamily Name Domain Identifier Family IdentifierProvenance Source (Version)
ISCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054493 3000071 SCOP2B (2022-06-29)
HSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054493 3000071 SCOP2B (2022-06-29)
GSCOP2B SuperfamilyImmunoglobulin (Ig) domain-like 8054493 3000071 SCOP2B (2022-06-29)
CSCOP2B SuperfamilyVirus ectodomain 8085620 3001628 SCOP2B (2022-06-29)
BSCOP2B SuperfamilyVirus ectodomain 8085620 3001628 SCOP2B (2022-06-29)
ASCOP2B SuperfamilyVirus ectodomain 8085620 3001628 SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
UBromodomaine6cm3U1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
SBromodomaine6cm3S1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
QAPHe6cm3Q1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: APHECOD (v294.1)
TBromodomaine6cm3T1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
RBromodomaine6cm3R1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
PAPHe6cm3P1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: APHECOD (v294.1)
OBromodomaine6cm3O1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
MBromodomaine6cm3M1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
KAPHe6cm3K1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: APHECOD (v294.1)
NBromodomaine6cm3N1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
LBromodomaine6cm3L1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
JAPHe6cm3J1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: APHECOD (v294.1)
IBromodomaine6cm3I1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
HBromodomaine6cm3H1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
GAPHe6cm3G1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: APHECOD (v294.1)
FBromodomaine6cm3F1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
EBromodomaine6cm3E1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
DAPHe6cm3D1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: APHECOD (v294.1)
CBromodomaine6cm3C1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
BBromodomaine6cm3B1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: BromodomainECOD (v294.1)
AAPHe6cm3A1 A: a/b three-layered sandwichesX: PriB N-terminal domain-likeH: HTHT: SH3F: APHECOD (v294.1)

Domain Annotation: CATH CATH Database Homepage

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
Q, S, U
Light ChainIGKV1 Kappaenvelope glycoprotein gp160SAbDab (2026-03-27)
K, M, O
Heavy ChainIGHV1 -envelope glycoprotein gp160SAbDab (2026-03-27)
J, L, N
Light ChainIGKV3 Kappaenvelope glycoprotein gp160SAbDab (2026-03-27)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
G, H, I
PF00047Immunoglobulin domain (ig)Immunoglobulin domainMembers of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-prote ...Members of the immunoglobulin superfamily are found in hundreds of proteins of different functions. Examples include antibodies, the giant muscle kinase titin and receptor tyrosine kinases. Immunoglobulin-like domains may be involved in protein-protein and protein-ligand interactions.
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
Q, S, U
8ANC195 Fab light chain---
P, R, T
8ANC195 Fab heavy chain---
K, M, O
17b Fab heavy chain---
J, L, N
17b Fab light chain---
G, H, I
T-cell surface glycoprotein CD4
D, E, F
Envelope glycoprotein gp160
A, B, C
Envelope glycoprotein gp160

Pharos: Disease Associations Pharos Homepage Annotation

ChainsDrug Target  Associated Disease
G, H, I
PharosP01730