Coxsackievirus A24v in complex with the D1-D2 fragment of ICAM-1
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| C [auth 3] | SCOP2B Superfamily | Positive stranded ssRNA viruses-like | 8068008 | 3000918 | SCOP2B (2022-06-29) |
| D [auth 4] | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054755 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A [auth 1] | e6eit11 | A: Cryptochrome/photolyase FAD-binding domain-related | X: Cryptochrome/photolyase FAD-binding domain-related | H: PriX | T: Peptidase_M1 | F: | ECOD (20:10:01) | |
| B [auth 2] | e6eit21 | A: Cryptochrome/photolyase FAD-binding domain-related | X: Cryptochrome/photolyase FAD-binding domain-related | H: PriX | T: Peptidase_M1 | F: | ECOD (20:10:01) | |
| C [auth 3] | e6eit31 | A: Cryptochrome/photolyase FAD-binding domain-related | X: Cryptochrome/photolyase FAD-binding domain-related | H: PriX | T: Peptidase_M1 | F: | ECOD (20:10:01) | |
| D [auth 4] | e6eit41 | A: Cryptochrome/photolyase FAD-binding domain-related | X: Cryptochrome/photolyase FAD-binding domain-related | H: PriX | T: Peptidase_M1 | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A [auth 1] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| B [auth 2] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| C [auth 3] | 2.60.120.20 | Mainly Beta | Sandwich | Jelly Rolls | CATH (4.3.0) | |
| D [auth 4] | 2.60.40.10 | Mainly Beta | Sandwich | Immunoglobulin-like | Immunoglobulins | CATH (4.3.0) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| D [auth 4] | PF03921 | Intercellular adhesion molecule (ICAM), N-terminal domain (ICAM_N) | Intercellular adhesion molecule (ICAM), N-terminal domain | ICAMs normally functions to promote intercellular adhesion and signalling. However, The N-terminal domain of the receptor binds to the rhinovirus 'canyon' surrounding the icosahedral 5-fold axes, during the viral attachment process [1]. This family ... | Domain |














