Structure of the chloroplast ribosome with chl-RRF and hibernation-promoting factor
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| D [auth AD] | SCOP2B Superfamily | Translational proteins | 8089154 | 3000811 | SCOP2B (2022-06-29) |
| E [auth AE] | SCOP2B Superfamily | Ribosomal protein L4 | 8080708 | 3001146 | SCOP2B (2022-06-29) |
| F [auth AF] | SCOP2B Superfamily | RL5-like | 8073876 | 3001709 | SCOP2B (2022-06-29) |
| H [auth AH] | SCOP2B Superfamily | L9 N-domain-like | 8070581 | 3000338 | SCOP2B (2022-06-29) |
| I [auth AJ] | SCOP2B Superfamily | Ribosomal protein L13 | 8066065 | 3001134 | SCOP2B (2022-06-29) |
| J [auth AK] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8072036 | 3000433 | SCOP2B (2022-06-29) |
| M [auth AN] | SCOP2B Superfamily | Prokaryotic ribosomal protein L17 | 8089018 | 3000995 | SCOP2B (2022-06-29) |
| O [auth AP] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8089130 | 3000334 | SCOP2B (2022-06-29) |
| Q [auth AR] | SCOP2B Superfamily | l21p-like | 8082449 | 3002005 | SCOP2B (2022-06-29) |
| S [auth AT] | SCOP2 Family | L23p | 8077090 | 4000943 | SCOP2 (2022-06-29) |
| S [auth AT] | SCOP2 Superfamily | Ribosomal proteins S24e, L23 and L15e | 8077091 | 3000210 | SCOP2 (2022-06-29) |
| T [auth AU] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8082517 | 3000334 | SCOP2B (2022-06-29) |
| Z [auth Ab] | SCOP2B Superfamily | Zn-binding ribosomal proteins | 8075064 | 3001320 | SCOP2B (2022-06-29) |
| BA [auth Ad] | SCOP2B Superfamily | L35p-like | 8083340 | 3000790 | SCOP2B (2022-06-29) |
| CA [auth Ae] | SCOP2B Superfamily | Ribosomal protein L36 | 8083320 | 3001346 | SCOP2B (2022-06-29) |
| IA [auth BB] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8098310 | 3001397 | SCOP2B (2022-06-29) |
| KA [auth BD] | SCOP2 Family | Ribosomal protein S4 | 8083403 | 4001399 | SCOP2 (2022-06-29) |
| KA [auth BD] | SCOP2 Superfamily | Alpha-L RNA-binding motif | 8083404 | 3001473 | SCOP2 (2022-06-29) |
| NA [auth BG] | SCOP2B Superfamily | Ribosomal protein S7 | 8077983 | 3000799 | SCOP2B (2022-06-29) |
| OA [auth BH] | SCOP2 Family | Ribosomal protein S8 | 8079062 | 4002027 | SCOP2 (2022-06-29) |
| OA [auth BH] | SCOP2 Superfamily | Ribosomal protein S8 | 8079063 | 3000709 | SCOP2 (2022-06-29) |
| PA [auth BI] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8082673 | 3000100 | SCOP2B (2022-06-29) |
| QA [auth BJ] | SCOP2B Superfamily | Ribosomal protein S10 | 8098942 | 3001336 | SCOP2B (2022-06-29) |
| RA [auth BK] | SCOP2B Superfamily | Translational machinery components | 8098296 | 3000571 | SCOP2B (2022-06-29) |
| TA [auth BM] | SCOP2 Family | Ribosomal protein S13 | 8098943 | 4000260 | SCOP2 (2022-06-29) |
| TA [auth BM] | SCOP2 Superfamily | S13-like H2TH domain | 8098944 | 3000053 | SCOP2 (2022-06-29) |
| UA [auth BN] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052598 | 3000068 | SCOP2B (2022-06-29) |
| VA [auth BO] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8072637 | 3001284 | SCOP2B (2022-06-29) |
| WA [auth BP] | SCOP2B Superfamily | Ribosomal protein S16 | 8066569 | 3000680 | SCOP2B (2022-06-29) |
| XA [auth BQ] | SCOP2 Family | Cold shock DNA-binding domain-like | 8059281 | 4001909 | SCOP2 (2022-06-29) |
| XA [auth BQ] | SCOP2 Superfamily | Nucleic acid-binding proteins | 8059282 | 3000135 | SCOP2 (2022-06-29) |
| ZA [auth BS] | SCOP2B Superfamily | Ribosomal protein S19 | 8086060 | 3000686 | SCOP2B (2022-06-29) |
| BB [auth BU] | SCOP2 Family | Ribosomal protein S21 | 8060182 | 4006173 | SCOP2 (2022-06-29) |
| BB [auth BU] | SCOP2 Superfamily | Ribosomal protein S21 | 8060183 | 3002159 | SCOP2 (2022-06-29) |
| CB [auth BV] | SCOP2 Family | YfiA-like | 8076006 | 4003461 | SCOP2 (2022-06-29) |
| CB [auth BV] | SCOP2 Superfamily | YfiA/CsgE-like | 8076007 | 3000912 | SCOP2 (2022-06-29) |
| SA [auth BL] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8098842 | 3000135 | SCOP2B (2022-06-29) |
| V [auth AX] | SCOP2B Superfamily | L28p-like | 8089408 | 3001966 | SCOP2B (2022-06-29) |
| P [auth AQ] | SCOP2B Superfamily | Ribosomal protein L20 | 8075018 | 3000563 | SCOP2B (2022-06-29) |
| N [auth AO] | SCOP2B Superfamily | Translational machinery components | 8074012 | 3000571 | SCOP2B (2022-06-29) |
| L [auth AM] | SCOP2 Family | Ribosomal protein L16p | 8076046 | 4003717 | SCOP2 (2022-06-29) |
| L [auth AM] | SCOP2 Superfamily | Ribosomal protein L16p/L10e | 8076047 | 3000884 | SCOP2 (2022-06-29) |
| K [auth AL] | SCOP2B Superfamily | Ribosomal proteins L15p and L18e | 8070567 | 3001045 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| C [auth AC] | V-set | e6eriAC1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| D [auth AD] | V-set | e6eriAD1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| E [auth AE] | Ald_deCOase | e6eriAE1 | A: alpha arrays | X: Rubredoxin-like | H: Ferritin/Heme oxygenase | T: Heme oxygenase/Ribonucleotide reductase | F: Ald_deCOase | ECOD (v295) |
| F [auth AF] | V-set | e6eriAF1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| G [auth AG] | V-set | e6eriAG1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| H [auth AH] | V-set | e6eriAH1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| I [auth AJ] | V-set | e6eriAJ1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| J [auth AK] | V-set | e6eriAK1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| M [auth AN] | V-set | e6eriAN1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| O [auth AP] | V-set | e6eriAP1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| Q [auth AR] | V-set | e6eriAR1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| R [auth AS] | V-set | e6eriAS1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| S [auth AT] | V-set | e6eriAT1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| T [auth AU] | V-set | e6eriAU1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| U [auth AW] | LRR_6 | e6eriAW1 | A: alpha arrays | X: CNF1/YfiH-like putative cysteine hydrolases | H: RIFT-related | T: FMN-binding split barrel 2 | F: LRR_6 | ECOD (v295) |
| X [auth AZ] | V-set | e6eriAZ1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| Z [auth Ab] | V-set | e6eriAb1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| AA [auth Ac] | V-set | e6eriAc1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| BA [auth Ad] | V-set | e6eriAd1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| CA [auth Ae] | V-set | e6eriAe1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| GA [auth Az] | V-set | e6eriAz1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| IA [auth BB] | V-set | e6eriBB1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| KA [auth BD] | V-set | e6eriBD1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| LA [auth BE] | V-set | e6eriBE1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| MA [auth BF] | V-set | e6eriBF1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| NA [auth BG] | V-set | e6eriBG1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| OA [auth BH] | V-set | e6eriBH1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| PA [auth BI] | V-set | e6eriBI1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| QA [auth BJ] | V-set | e6eriBJ1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| RA [auth BK] | V-set | e6eriBK1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| TA [auth BM] | V-set | e6eriBM1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| UA [auth BN] | V-set | e6eriBN1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| VA [auth BO] | V-set | e6eriBO1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| WA [auth BP] | V-set | e6eriBP1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| XA [auth BQ] | V-set | e6eriBQ1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| YA [auth BR] | V-set | e6eriBR1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| ZA [auth BS] | V-set | e6eriBS1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| AB [auth BT] | V-set | e6eriBT1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| BB [auth BU] | V-set | e6eriBU1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| CB [auth BV] | V-set | e6eriBV1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| SA [auth BL] | V-set | e6eriBL1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| JA [auth BC] | V-set | e6eriBC1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| Y [auth Aa] | V-set | e6eriAa1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| W [auth AY] | V-set | e6eriAY1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| V [auth AX] | V-set | e6eriAX1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| P [auth AQ] | V-set | e6eriAQ1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| N [auth AO] | V-set | e6eriAO1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| L [auth AM] | V-set | e6eriAM1 | A: alpha arrays | X: FAD-linked reductases, C-terminal domain-like | H: FAD-linked reductases-C | T: FAD-linked reductases-C | F: V-set | ECOD (v295) |
| K [auth AL] | VP4_haemagglut | e6eriAL1 | A: alpha arrays | X: Phosphorylase/hydrolase-like | H: Peptidyl-tRNA hydrolase-like | T: Peptidyl-tRNA hydrolase-like | F: VP4_haemagglut | ECOD (v295) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| B [auth AB] | PF00471 | Ribosomal protein L33 (Ribosomal_L33) | Ribosomal protein L33 | - | Family |
| C [auth AC] | PF00468 | Ribosomal protein L34 (Ribosomal_L34) | Ribosomal protein L34 | - | Family |
| C [auth AC] | PF03947 | Ribosomal Proteins L2, C-terminal domain (Ribosomal_L2_C) | Ribosomal Proteins L2, C-terminal domain | Domain | |
| C [auth AC] | PF00181 | Ribosomal Proteins L2, RNA binding N-terminal domain (Ribosomal_L2_N) | Ribosomal Proteins L2, RNA binding N-terminal domain | Domain | |
| D [auth AD] | PF00297 | Ribosomal protein L3 (Ribosomal_L3) | Ribosomal protein L3 | - | Family |
| D [auth AD] | PF01632 | Ribosomal protein L35 (Ribosomal_L35p) | Ribosomal protein L35 | - | Family |
| E [auth AE] | PF00573 | Ribosomal protein L4/L1 family (Ribosomal_L4) | Ribosomal protein L4/L1 family | - | Family |
| F [auth AF] | PF00281 | Ribosomal protein L5 (Ribosomal_L5) | Ribosomal protein L5 | Domain | |
| F [auth AF] | PF17257 | Family of unknown function (DUF5323) (DUF5323) | Family of unknown function (DUF5323) | - | Family |
| F [auth AF] | PF00673 | ribosomal L5P family C-terminus (Ribosomal_L5_C) | ribosomal L5P family C-terminus | This region is found associated with Pfam:PF00281. | Domain |
| G [auth AG] | PF00347 | Ribosomal protein L6 (Ribosomal_L6) | Ribosomal protein L6 | Domain | |
| H [auth AH] | PF01281 | Ribosomal protein L9, N-terminal domain (Ribosomal_L9_N) | Ribosomal protein L9, N-terminal domain | Domain | |
| I [auth AJ] | PF00572 | Ribosomal protein L13 (Ribosomal_L13) | Ribosomal protein L13 | - | Family |
| J [auth AK] | PF00238 | Ribosomal protein L14p/L23e (Ribosomal_L14) | Ribosomal protein L14p/L23e | Domain | |
| M [auth AN] | PF01196 | Ribosomal protein L17 (Ribosomal_L17) | Ribosomal protein L17 | - | Family |
| O [auth AP] | PF01245 | Ribosomal protein L19 (Ribosomal_L19) | Ribosomal protein L19 | - | Family |
| Q [auth AR] | PF00829 | Ribosomal prokaryotic L21 protein (Ribosomal_L21p) | Ribosomal prokaryotic L21 protein | - | Family |
| R [auth AS] | PF00237 | Ribosomal protein L22p/L17e (Ribosomal_L22) | Ribosomal protein L22p/L17e | This family includes L22 from prokaryotes and chloroplasts and L17 from eukaryotes. | Domain |
| S [auth AT] | PF00276 | Ribosomal protein L23 (Ribosomal_L23) | Ribosomal protein L23 | - | Family |
| T [auth AU] | PF17136 | Large ribosomal subunit protein uL24, C-terminal domain (ribosomal_L24) | Large ribosomal subunit protein uL24, C-terminal domain | This entry describes the C-terminal domain in large ribosomal subunit protein uL24 (also known as RPL26). RPL26 is one of the proteins from the large ribosomal subunit. In their mature form, these proteins have 103 to 150 amino-acid residues. RPL26 m ... | Domain |
| T [auth AU] | PF00467 | KOW motif (KOW) | KOW motif | - | Family |
| U [auth AW] | PF01016 | Ribosomal L27 protein (Ribosomal_L27) | Ribosomal L27 protein | - | Family |
| X [auth AZ] | PF01197 | Ribosomal protein L31 (Ribosomal_L31) | Ribosomal protein L31 | - | Family |
| IA [auth BB] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| KA [auth BD] | PF00163 | Ribosomal protein S4/S9 N-terminal domain (Ribosomal_S4) | Ribosomal protein S4/S9 N-terminal domain | - | Family |
| KA [auth BD] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| LA [auth BE] | PF03719 | Ribosomal protein S5, C-terminal domain (Ribosomal_S5_C) | Ribosomal protein S5, C-terminal domain | Domain | |
| LA [auth BE] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain | |
| MA [auth BF] | PF01250 | Ribosomal protein S6 (Ribosomal_S6) | Ribosomal protein S6 | Domain | |
| NA [auth BG] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| OA [auth BH] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| PA [auth BI] | PF00380 | Ribosomal protein S9/S16 (Ribosomal_S9) | Ribosomal protein S9/S16 | - | Family |
| QA [auth BJ] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| RA [auth BK] | PF00411 | Ribosomal protein S11 (Ribosomal_S11) | Ribosomal protein S11 | - | Family |
| TA [auth BM] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| UA [auth BN] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| VA [auth BO] | PF00312 | Ribosomal protein S15 (Ribosomal_S15) | Ribosomal protein S15 | Domain | |
| WA [auth BP] | PF00886 | Ribosomal protein S16 (Ribosomal_S16) | Ribosomal protein S16 | - | Family |
| XA [auth BQ] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| YA [auth BR] | PF01084 | Ribosomal protein S18 (Ribosomal_S18) | Ribosomal protein S18 | - | Family |
| ZA [auth BS] | PF00203 | Ribosomal protein S19 (Ribosomal_S19) | Ribosomal protein S19 | Domain | |
| AB [auth BT] | PF01649 | Ribosomal protein S20 (Ribosomal_S20p) | Ribosomal protein S20 | - | Family |
| BB [auth BU] | PF01165 | Ribosomal protein S21 (Ribosomal_S21) | Ribosomal protein S21 | - | Family |
| CB [auth BV] | PF02482 | Sigma 54 modulation protein / S30EA ribosomal protein (Ribosomal_S30AE) | Sigma 54 modulation protein / S30EA ribosomal protein | This Pfam family contains the sigma-54 modulation protein family and the S30AE family of ribosomal proteins which includes the light- repressed protein (lrtA) (Swiss:P47908) [1]. | Domain |
| DB [auth BW] | PF17067 | Ribosomal protein S31e (RPS31) | Ribosomal protein S31e | - | Family |
| SA [auth BL] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| JA [auth BC] | PF00189 | Ribosomal protein S3, C-terminal domain (Ribosomal_S3_C) | Ribosomal protein S3, C-terminal domain | This family contains a central domain Pfam:PF00013, hence the amino and carboxyl terminal domains are stored separately. This is a minimal carboxyl-terminal domain. Some are much longer. | Domain |
| W [auth AY] | PF00831 | Ribosomal L29 protein (Ribosomal_L29) | Ribosomal L29 protein | - | Family |
| V [auth AX] | PF00830 | Ribosomal L28 family (Ribosomal_L28) | Ribosomal L28 family | - | Family |
| P [auth AQ] | PF00453 | Ribosomal protein L20 (Ribosomal_L20) | Ribosomal protein L20 | - | Family |
| N [auth AO] | PF00861 | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast (Ribosomal_L18p) | Ribosomal L18 of archaea, bacteria, mitoch. and chloroplast | - | Family |
| L [auth AM] | PF00252 | Ribosomal protein L16p/L10e (Ribosomal_L16) | Ribosomal protein L16p/L10e | Domain | |
| K [auth AL] | PF00828 | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A (Ribosomal_L27A) | Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A | This family includes higher eukaryotic ribosomal 60S L27A, archaeal 50S L18e, prokaryotic 50S L15, fungal mitochondrial L10, plant L27A, mitochondrial L15 and chloroplast L18-3 proteins. | Domain |














