6EUA | pdb_00006eua

The fibrinogen-like domain of human Angptl3

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification
Pharos: Disease Associations

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
C	d6euac1	Alpha and beta proteins (a+b)	Fibrinogen C-terminal domain-like	Fibrinogen C-terminal domain-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
C	d6euac2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d6euab1	Alpha and beta proteins (a+b)	Fibrinogen C-terminal domain-like	Fibrinogen C-terminal domain-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
B	d6euab2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d6euaa1	Alpha and beta proteins (a+b)	Fibrinogen C-terminal domain-like	Fibrinogen C-terminal domain-like	automated matches	automated matches	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)
A	d6euaa2	Artifacts	Tags	Tags	Tags	N-terminal Tags	Human (Homo sapiens ) [TaxId: 9606 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C	SCOP2B Superfamily	Fibrinogen C-terminal domain-like	8070790	3001395	SCOP2B (2022-06-29)
B	SCOP2 Family	Fibrinogen C-terminal domain-like	8070789	4002544	SCOP2 (2022-06-29)
B	SCOP2 Superfamily	Fibrinogen C-terminal domain-like	8070790	3001395	SCOP2 (2022-06-29)
A	SCOP2B Superfamily	Fibrinogen C-terminal domain-like	8070790	3001395	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C		e6euaC1	A: OB-fold	X: Nucleic acid-binding protein	H: Nucleotidyltransferase	T: Adeno_knob	F:	ECOD (20:10:01)
B		e6euaB1	A: OB-fold	X: Nucleic acid-binding protein	H: Nucleotidyltransferase	T: Adeno_knob	F:	ECOD (20:10:01)
A		e6euaA1	A: OB-fold	X: Nucleic acid-binding protein	H: Nucleotidyltransferase	T: V-set	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C	3.90.215.10	Alpha Beta	Alpha-Beta Complex	Gamma Fibrinogen	Chain A, domain 1	CATH (4.3.0)
B	3.90.215.10	Alpha Beta	Alpha-Beta Complex	Gamma Fibrinogen	Chain A, domain 1	CATH (4.3.0)
A	3.90.215.10	Alpha Beta	Alpha-Beta Complex	Gamma Fibrinogen	Chain A, domain 1	CATH (4.3.0)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C	PF00147	Fibrinogen beta and gamma chains, C-terminal globular domain (Fibrinogen_C)	Fibrinogen beta and gamma chains, C-terminal globular domain		Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
A, B, C	Angiopoietin-related protein 3	molecular function activator activity molecular function regulator activity signaling receptor regulator activity growth factor activity receptor ligand activity signaling receptor activator activity enzyme regulator activity molecular function inhibitor activity enzyme inhibitor activity protein binding binding enzyme binding lipase binding cell adhesion molecule binding molecular function activator activity molecular function regulator activity signaling receptor regulator activity growth factor activity receptor ligand activity signaling receptor activator activity enzyme regulator activity molecular function inhibitor activity enzyme inhibitor activity protein binding binding enzyme binding lipase binding cell adhesion molecule binding protein-containing complex binding integrin binding signaling receptor binding lipase inhibitor activity phospholipase inhibitor activity heparin binding glycosaminoglycan binding carbohydrate derivative binding sulfur compound binding	cell adhesion cell-matrix adhesion cell-substrate adhesion cellular process phospholipid homeostasis chemical homeostasis homeostatic process lipid homeostasis phospholipid metabolic process organophosphate metabolic process phosphate-containing compound metabolic process metabolic process primary metabolic process phosphorus metabolic process cell adhesion cell-matrix adhesion cell-substrate adhesion cellular process phospholipid homeostasis chemical homeostasis homeostatic process lipid homeostasis phospholipid metabolic process organophosphate metabolic process phosphate-containing compound metabolic process metabolic process primary metabolic process phosphorus metabolic process lipid metabolic process developmental process multicellular organismal process blood vessel morphogenesis tube development angiogenesis vasculature development circulatory system development anatomical structure morphogenesis multicellular organism development tube morphogenesis anatomical structure formation involved in morphogenesis anatomical structure development blood vessel development system development triglyceride homeostasis acylglycerol homeostasis cellular response to stimulus regulation of biological process integrin-mediated signaling pathway regulation of cellular process cell surface receptor signaling pathway response to stimulus signaling biological regulation cell communication signal transduction lipid catabolic process catabolic process phospholipid catabolic process organophosphate catabolic process sterol homeostasis cholesterol homeostasis carbohydrate metabolic process polyol metabolic process alcohol metabolic process small molecule metabolic process glycerol metabolic process regulation of lipid metabolic process positive regulation of biological process regulation of catabolic process regulation of lipid catabolic process regulation of primary metabolic process positive regulation of catabolic process positive regulation of metabolic process positive regulation of lipid catabolic process positive regulation of lipid metabolic process regulation of metabolic process positive regulation of cellular process secondary alcohol metabolic process sterol metabolic process steroid metabolic process cholesterol metabolic process artery development artery morphogenesis fatty acid metabolic process oxoacid metabolic process carboxylic acid metabolic process monocarboxylic acid metabolic process organic acid metabolic process plasma lipoprotein particle organization regulation of cellular component organization protein-containing complex organization protein-containing complex remodeling protein-lipid complex organization plasma lipoprotein particle remodeling regulation of plasma lipoprotein particle levels cellular component organization regulation of chylomicron remodeling chylomicron remodeling triglyceride-rich lipoprotein particle remodeling protein-lipid complex remodeling regulation of multicellular organismal process cellular component organization or biogenesis regulation of developmental process regulation of vasculature development positive regulation of developmental process regulation of anatomical structure morphogenesis regulation of multicellular organismal development positive regulation of angiogenesis positive regulation of vasculature development regulation of angiogenesis positive regulation of multicellular organismal process positive regulation of locomotion regulation of cell motility positive regulation of cell migration regulation of locomotion positive regulation of cell motility regulation of cell migration cell migration cell motility locomotion negative regulation of biological process negative regulation of cellular process very-low-density lipoprotein particle remodeling negative regulation of very-low-density lipoprotein particle remodeling negative regulation of cellular component organization regulation of very-low-density lipoprotein particle remodeling negative regulation of multicellular organismal process lipid storage nutrient storage response to hormone response to endogenous stimulus response to chemical	cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium cell surface membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cell projection cellular anatomical structure cell leading edge plasma membrane bounded cell projection lamellipodium cell surface membrane-bounded organelle intracellular anatomical structure early endosome endosome intracellular vesicle intracellular membrane-bounded organelle endomembrane system intracellular organelle cytoplasmic vesicle organelle cytoplasm vesicle Golgi apparatus extracellular region extracellular space

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C	IPR014716	Fibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1	Homologous Superfamily
A, B, C	IPR002181	Fibrinogen, alpha/beta/gamma chain, C-terminal globular domain	Domain
A, B, C	IPR050373	Fibrinogen C-terminal domain-containing protein	Family
A, B, C	IPR036056	Fibrinogen-like, C-terminal	Homologous Superfamily

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
A, B, C	Pharos: Q9Y5C1	familial hypobetalipoproteinemia 2 abetalipoproteinemia Liver Cirrhosis, Experimental inborn errors of metabolism non-alcoholic fatty liver disease ovarian cancer gastric carcinoma hypolipoproteinemia nephrosclerosis pancreatic ductal adenocarcinoma

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.