6GHU
Crystal structure of the periplasmic domain of XcpY, oP crystal form.
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth B] | GspL_C | e6ghuB1 | A: a+b two layers | X: RRF/tRNA synthetase additional domain-like | H: General secretion pathway protein M (EpsM) periplasmic domain-related (From Topology) | T: General secretion pathway protein M (EpsM) periplasmic domain-related | F: GspL_C | ECOD (1.6) |
B [auth A] | GspL_C | e6ghuA1 | A: a+b two layers | X: RRF/tRNA synthetase additional domain-like | H: General secretion pathway protein M (EpsM) periplasmic domain-related (From Topology) | T: General secretion pathway protein M (EpsM) periplasmic domain-related | F: GspL_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth B], B [auth A] | PF12693 | GspL periplasmic domain (GspL_C) | GspL periplasmic domain | This domain is the periplasmic domain of the GspL/EpsL family proteins. These proteins are involved in type II secretion systems. | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
A [auth B], B [auth A] | IPR025691 | GspL periplasmic domain | Domain |
A [auth B], B [auth A] | IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily |
A [auth B], B [auth A] | IPR024230 | GspL, cytoplasmic actin-ATPase-like domain | Domain |
A [auth B], B [auth A] | IPR007812 | Type II secretion system protein GspL | Family |