6GRD | pdb_00006grd

eukaryotic junction-resolving enzyme GEN-1 binding with Cesium


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Ae6grdA1 A: L-aspartase middle domain-likeX: gp11/gp12 receptor-binding domainH: gp11/gp12 receptor-binding domainT: OB_NTP_bindF:ECOD (20:10:01)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00867XPG I-region (XPG_I)XPG I-region- Family
PF18380Holliday junction resolvase Gen1 C-terminal domain (GEN1_C)Holliday junction resolvase Gen1 C-terminal domainThis is the C-terminal domain found in GEN1 resolvase. It is composed of three-strand antiparallel beta sheets and four alpha helices [1]. GEN1 protein, a member of the XPG/Rad2 family of structure-selective endonucleases, is specialized for the clea ...This is the C-terminal domain found in GEN1 resolvase. It is composed of three-strand antiparallel beta sheets and four alpha helices [1]. GEN1 protein, a member of the XPG/Rad2 family of structure-selective endonucleases, is specialized for the cleavage of Holliday junction recombination intermediates [2]. Structural comparison indicates that the C-terminal domain is similar to a series of chromobox homology proteins [1]. Functional analysis indicates that the chromodomain provides an additional DNA binding site necessary for efficient HJ cleavage, and its truncation severely hampers GEN1's catalytic activity [3].
Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage