Annotations: 6H6Y

GI.1 human norovirus protruding domain in complex with Nano-7

External Resource: Annotation

Domain Annotation: SCOP/SCOPe Classification
Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Domain Annotation: CATH
SAbDab Antibody Annotation
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage

Chains	Domain Info	Class	Fold	Superfamily	Family	Domain	Species	Provenance Source (Version)
H	d6h6yh1	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	automated matches	(Vicugna pacos ) [TaxId: 30538 ],	SCOPe (2.08)
H	d6h6yh2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Vicugna pacos ) [TaxId: 30538 ],	SCOPe (2.08)
G	d6h6yg1	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	automated matches	(Vicugna pacos ) [TaxId: 30538 ],	SCOPe (2.08)
G	d6h6yg2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Vicugna pacos ) [TaxId: 30538 ],	SCOPe (2.08)
F	d6h6yf1	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	automated matches	(Vicugna pacos ) [TaxId: 30538 ],	SCOPe (2.08)
F	d6h6yf2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Vicugna pacos ) [TaxId: 30538 ],	SCOPe (2.08)
E	d6h6ye1	All beta proteins	Immunoglobulin-like beta-sandwich	Immunoglobulin	V set domains (antibody variable domain-like)	automated matches	(Vicugna pacos ) [TaxId: 30538 ],	SCOPe (2.08)
E	d6h6ye2	Artifacts	Tags	Tags	Tags	N-terminal Tags	(Vicugna pacos ) [TaxId: 30538 ],	SCOPe (2.08)

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
D	SCOP2B Superfamily	Astrovirus capsid protein, P1 domain-like	8093126	3002535	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Norovirus P2 domain-like	8093128	3002678	SCOP2B (2022-06-29)
D	SCOP2B Superfamily	Astrovirus capsid protein, P1 domain-like	8093126	3002535	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Astrovirus capsid protein, P1 domain-like	8093126	3002535	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Norovirus P2 domain-like	8093128	3002678	SCOP2B (2022-06-29)
C	SCOP2B Superfamily	Astrovirus capsid protein, P1 domain-like	8093126	3002535	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Astrovirus capsid protein, P1 domain-like	8093126	3002535	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Astrovirus capsid protein, P1 domain-like	8093126	3002535	SCOP2B (2022-06-29)
B	SCOP2B Superfamily	Norovirus P2 domain-like	8093128	3002678	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Astrovirus capsid protein, P1 domain-like	8093126	3002535	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Norovirus P2 domain-like	8093128	3002678	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	Astrovirus capsid protein, P1 domain-like	8093126	3002535	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
H	Oxidored_q2	e6h6yH1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Oxidored_q2	ECOD (v295.2)
G	Oxidored_q2	e6h6yG1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Oxidored_q2	ECOD (v295.2)
F	Oxidored_q2	e6h6yF1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Oxidored_q2	ECOD (v295.2)
E	Lipocalin_7	e6h6yE1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Lipocalin_7	ECOD (v295.2)
D	Oxidored_q2	e6h6yD1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Oxidored_q2	ECOD (v295.2)
C	Oxidored_q2	e6h6yC1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Oxidored_q2	ECOD (v295.2)
B	Oxidored_q2	e6h6yB1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Oxidored_q2	ECOD (v295.2)
A	Oxidored_q2	e6h6yA1	A: alpha arrays	X: PriB N-terminal domain-like	H: Ubiquitin-related	T: Ubiquitin-like	F: Oxidored_q2	ECOD (v295.2)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
D	2.40.510.10	Mainly Beta	Beta Barrel	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	CATH (4.3.0)
D	2.40.30.120	Mainly Beta	Beta Barrel	Elongation Factor Tu (Ef-tu)	domain 3	CATH (4.3.0)
C	2.40.510.10	Mainly Beta	Beta Barrel	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	CATH (4.3.0)
C	2.40.30.120	Mainly Beta	Beta Barrel	Elongation Factor Tu (Ef-tu)	domain 3	CATH (4.3.0)
B	2.40.510.10	Mainly Beta	Beta Barrel	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	CATH (4.3.0)
B	2.40.30.120	Mainly Beta	Beta Barrel	Elongation Factor Tu (Ef-tu)	domain 3	CATH (4.3.0)
A	2.40.510.10	Mainly Beta	Beta Barrel	Nucleoplasmin-like/VP (viral coat and capsid proteins)	Positive stranded ssRNA viruses	CATH (4.3.0)
A	2.40.30.120	Mainly Beta	Beta Barrel	Elongation Factor Tu (Ef-tu)	domain 3	CATH (4.3.0)

SAbDab Antibody Annotation SAbDab Database Homepage

Chain	Chain Class	Chain Subclass	Chain Type	Antigen Name(s)	Provenance Source
E, F, G, H	Heavy Chain	IGHV1	-	capsid protein vp1	SAbDab (2026-09-18)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, B, C, D	PF08435	Calicivirus coat protein C-terminal (Calici_coat_C)	Calicivirus coat protein C-terminal	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
E, F, G, H	Nanobody (VHH) Nano-7	-	-	-
A, B, C, D	Capsid protein VP1	identical protein binding protein binding binding	-	viral capsid T=3 icosahedral viral capsid icosahedral viral capsid virion component host cellular component host intracellular part cellular anatomical structure host cell cytoplasm host cell part host intracellular region other organism part

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, B, C, D	IPR029053	Viral coat protein subunit	Homologous Superfamily
A, B, C, D	IPR004005	Calicivirus coat protein	Domain
A, B, C, D	IPR013643	Calicivirus coat protein C-terminal	Domain
A, B, C, D	IPR033703	Picornavirus/Calicivirus coat protein	Domain