6K33
Structure of PSI-isiA supercomplex from Thermosynechococcus vulcanus
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth aA] | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8094285 | 3000850 | SCOP2B (2022-06-29) |
KA [auth cA] | SCOP2 Family | Photosystem I subunits PsaA/PsaB | 8094284 | 4002118 | SCOP2 (2022-06-29) |
KA [auth cA] | SCOP2 Superfamily | Photosystem I subunits PsaA/PsaB | 8094285 | 3000850 | SCOP2 (2022-06-29) |
S [auth bA] | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8094285 | 3000850 | SCOP2B (2022-06-29) |
B [auth aB] | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8093600 | 3000850 | SCOP2B (2022-06-29) |
LA [auth cB] | SCOP2B Superfamily | Photosystem I subunits PsaA/PsaB | 8093600 | 3000850 | SCOP2B (2022-06-29) |
T [auth bB] | SCOP2 Family | Photosystem I subunits PsaA/PsaB | 8093599 | 4002118 | SCOP2 (2022-06-29) |
T [auth bB] | SCOP2 Superfamily | Photosystem I subunits PsaA/PsaB | 8093600 | 3000850 | SCOP2 (2022-06-29) |
C [auth aC] | SCOP2 Family | 7-Fe ferredoxin | 8093601 | 4001227 | SCOP2 (2022-06-29) |
C [auth aC] | SCOP2 Superfamily | 4Fe-4S ferredoxins | 8093602 | 3000020 | SCOP2 (2022-06-29) |
U [auth bC] | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8093602 | 3000020 | SCOP2B (2022-06-29) |
MA [auth cC] | SCOP2B Superfamily | 4Fe-4S ferredoxins | 8093602 | 3000020 | SCOP2B (2022-06-29) |
D [auth aD] | SCOP2 Family | Photosystem I subunit PsaD | 8093603 | 4003498 | SCOP2 (2022-06-29) |
D [auth aD] | SCOP2 Superfamily | Photosystem I subunit PsaD | 8093604 | 3000951 | SCOP2 (2022-06-29) |
V [auth bD] | SCOP2B Superfamily | Photosystem I subunit PsaD | 8093604 | 3000951 | SCOP2B (2022-06-29) |
NA [auth cD] | SCOP2B Superfamily | Photosystem I subunit PsaD | 8093604 | 3000951 | SCOP2B (2022-06-29) |
I [auth aK] | SCOP2 Family | Photosystem I reaction center subunit X PsaK | 8094310 | 4002128 | SCOP2 (2022-06-29) |
I [auth aK] | SCOP2 Superfamily | Photosystem I reaction center subunit X PsaK | 8094311 | 3000859 | SCOP2 (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth aA] | PF00223 | e6k33aA2 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00223 | ECOD (1.6) |
A [auth aA] | PF00223 | e6k33aA1 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00223 | ECOD (1.6) |
KA [auth cA] | PF00223 | e6k33cA1 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00223 | ECOD (1.6) |
KA [auth cA] | PF00223 | e6k33cA2 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00223 | ECOD (1.6) |
S [auth bA] | PF00223 | e6k33bA2 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00223 | ECOD (1.6) |
S [auth bA] | PF00223 | e6k33bA1 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00223 | ECOD (1.6) |
B [auth aB] | PF00223 | e6k33aB1 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00223 | ECOD (1.6) |
B [auth aB] | PF00223 | e6k33aB2 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00223 | ECOD (1.6) |
LA [auth cB] | PF00223 | e6k33cB2 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00223 | ECOD (1.6) |
LA [auth cB] | PF00223 | e6k33cB1 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00223 | ECOD (1.6) |
T [auth bB] | PF00223 | e6k33bB1 | A: alpha bundles | X: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | H: Bacterial photosystem II reaction centre L and M subunits-like (From Topology) | T: Bacterial photosystem II reaction centre L and M subunits-like | F: PF00223 | ECOD (1.6) |
T [auth bB] | PF00223 | e6k33bB2 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00223 | ECOD (1.6) |
C [auth aC] | PF00037 | e6k33aC1 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: PF00037 | ECOD (1.6) |
U [auth bC] | PF00037 | e6k33bC1 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: PF00037 | ECOD (1.6) |
MA [auth cC] | PF00037 | e6k33cC1 | A: a+b two layers | X: 4Fe-4S ferredoxin (From Topology) | H: 4Fe-4S ferredoxin (From Topology) | T: 4Fe-4S ferredoxin | F: PF00037 | ECOD (1.6) |
D [auth aD] | PF02531 | e6k33aD1 | A: a+b two layers | X: Photosystem I subunit PsaD (From Topology) | H: Photosystem I subunit PsaD (From Topology) | T: Photosystem I subunit PsaD | F: PF02531 | ECOD (1.6) |
V [auth bD] | PF02531 | e6k33bD1 | A: a+b two layers | X: Photosystem I subunit PsaD (From Topology) | H: Photosystem I subunit PsaD (From Topology) | T: Photosystem I subunit PsaD | F: PF02531 | ECOD (1.6) |
NA [auth cD] | PF02531 | e6k33cD1 | A: a+b two layers | X: Photosystem I subunit PsaD (From Topology) | H: Photosystem I subunit PsaD (From Topology) | T: Photosystem I subunit PsaD | F: PF02531 | ECOD (1.6) |
E [auth aE] | PF02427 | e6k33aE1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF02427 | ECOD (1.6) |
OA [auth cE] | PF02427 | e6k33cE1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF02427 | ECOD (1.6) |
W [auth bE] | PF02427 | e6k33bE1 | A: beta barrels | X: SH3 | H: SH3 | T: SH3 | F: PF02427 | ECOD (1.6) |
F [auth aF] | PF02507 | e6k33aF1 | A: extended segments | X: Subunit III of photosystem I reaction centre, PsaF (From Topology) | H: Subunit III of photosystem I reaction centre, PsaF (From Topology) | T: Subunit III of photosystem I reaction centre, PsaF | F: PF02507 | ECOD (1.6) |
PA [auth cF] | PF02507 | e6k33cF1 | A: extended segments | X: Subunit III of photosystem I reaction centre, PsaF (From Topology) | H: Subunit III of photosystem I reaction centre, PsaF (From Topology) | T: Subunit III of photosystem I reaction centre, PsaF | F: PF02507 | ECOD (1.6) |
X [auth bF] | PF02507 | e6k33bF1 | A: extended segments | X: Subunit III of photosystem I reaction centre, PsaF (From Topology) | H: Subunit III of photosystem I reaction centre, PsaF (From Topology) | T: Subunit III of photosystem I reaction centre, PsaF | F: PF02507 | ECOD (1.6) |
G [auth aI] | PF00796 | e6k33aI1 | A: extended segments | X: Subunit VIII of photosystem I reaction centre, PsaI (From Topology) | H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology) | T: Subunit VIII of photosystem I reaction centre, PsaI | F: PF00796 | ECOD (1.6) |
QA [auth cI] | PF00796 | e6k33cI1 | A: extended segments | X: Subunit VIII of photosystem I reaction centre, PsaI (From Topology) | H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology) | T: Subunit VIII of photosystem I reaction centre, PsaI | F: PF00796 | ECOD (1.6) |
Y [auth bI] | PF00796 | e6k33bI1 | A: extended segments | X: Subunit VIII of photosystem I reaction centre, PsaI (From Topology) | H: Subunit VIII of photosystem I reaction centre, PsaI (From Topology) | T: Subunit VIII of photosystem I reaction centre, PsaI | F: PF00796 | ECOD (1.6) |
H [auth aJ] | PF01701 | e6k33aJ1 | A: extended segments | X: Subunit IX of photosystem I reaction centre, PsaJ (From Topology) | H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology) | T: Subunit IX of photosystem I reaction centre, PsaJ | F: PF01701 | ECOD (1.6) |
RA [auth cJ] | PF01701 | e6k33cJ1 | A: extended segments | X: Subunit IX of photosystem I reaction centre, PsaJ (From Topology) | H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology) | T: Subunit IX of photosystem I reaction centre, PsaJ | F: PF01701 | ECOD (1.6) |
Z [auth bJ] | PF01701 | e6k33bJ1 | A: extended segments | X: Subunit IX of photosystem I reaction centre, PsaJ (From Topology) | H: Subunit IX of photosystem I reaction centre, PsaJ (From Topology) | T: Subunit IX of photosystem I reaction centre, PsaJ | F: PF01701 | ECOD (1.6) |
AA [auth bK] | PF01241 | e6k33bK1 | A: alpha bundles | X: Photosystem I reaction center subunit X, PsaK (From Topology) | H: Photosystem I reaction center subunit X, PsaK (From Topology) | T: Photosystem I reaction center subunit X, PsaK | F: PF01241 | ECOD (1.6) |
I [auth aK] | PF01241 | e6k33aK1 | A: alpha bundles | X: Photosystem I reaction center subunit X, PsaK (From Topology) | H: Photosystem I reaction center subunit X, PsaK (From Topology) | T: Photosystem I reaction center subunit X, PsaK | F: PF01241 | ECOD (1.6) |
SA [auth cK] | PF01241 | e6k33cK1 | A: alpha bundles | X: Photosystem I reaction center subunit X, PsaK (From Topology) | H: Photosystem I reaction center subunit X, PsaK (From Topology) | T: Photosystem I reaction center subunit X, PsaK | F: PF01241 | ECOD (1.6) |
TA [auth cL] | PF02605 | e6k33cL1 | A: alpha bundles | X: Photosystem I reaction center subunit XI, PsaL (From Topology) | H: Photosystem I reaction center subunit XI, PsaL (From Topology) | T: Photosystem I reaction center subunit XI, PsaL | F: PF02605 | ECOD (1.6) |
BA [auth bL] | PF02605 | e6k33bL1 | A: alpha bundles | X: Photosystem I reaction center subunit XI, PsaL (From Topology) | H: Photosystem I reaction center subunit XI, PsaL (From Topology) | T: Photosystem I reaction center subunit XI, PsaL | F: PF02605 | ECOD (1.6) |
J [auth aL] | PF02605 | e6k33aL1 | A: alpha bundles | X: Photosystem I reaction center subunit XI, PsaL (From Topology) | H: Photosystem I reaction center subunit XI, PsaL (From Topology) | T: Photosystem I reaction center subunit XI, PsaL | F: PF02605 | ECOD (1.6) |
CA [auth bM] | PF07465 | e6k33bM1 | A: extended segments | X: Subunit XII of photosystem I reaction centre, PsaM (From Topology) | H: Subunit XII of photosystem I reaction centre, PsaM (From Topology) | T: Subunit XII of photosystem I reaction centre, PsaM | F: PF07465 | ECOD (1.6) |
K [auth aM] | PF07465 | e6k33aM1 | A: extended segments | X: Subunit XII of photosystem I reaction centre, PsaM (From Topology) | H: Subunit XII of photosystem I reaction centre, PsaM (From Topology) | T: Subunit XII of photosystem I reaction centre, PsaM | F: PF07465 | ECOD (1.6) |
UA [auth cM] | PF07465 | e6k33cM1 | A: extended segments | X: Subunit XII of photosystem I reaction centre, PsaM (From Topology) | H: Subunit XII of photosystem I reaction centre, PsaM (From Topology) | T: Subunit XII of photosystem I reaction centre, PsaM | F: PF07465 | ECOD (1.6) |
DA [auth bX] | PF08078 | e6k33bX1 | A: extended segments | X: Subunit PsaX of photosystem I reaction centre (From Topology) | H: Subunit PsaX of photosystem I reaction centre (From Topology) | T: Subunit PsaX of photosystem I reaction centre | F: PF08078 | ECOD (1.6) |
L [auth aX] | PF08078 | e6k33aX1 | A: extended segments | X: Subunit PsaX of photosystem I reaction centre (From Topology) | H: Subunit PsaX of photosystem I reaction centre (From Topology) | T: Subunit PsaX of photosystem I reaction centre | F: PF08078 | ECOD (1.6) |
VA [auth cX] | PF08078 | e6k33cX1 | A: extended segments | X: Subunit PsaX of photosystem I reaction centre (From Topology) | H: Subunit PsaX of photosystem I reaction centre (From Topology) | T: Subunit PsaX of photosystem I reaction centre | F: PF08078 | ECOD (1.6) |
BB [auth c6] | PF00421 | e6k33c61 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
EA [auth b1] | PF00421 | e6k33b11 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
FA [auth b2] | PF00421 | e6k33b21 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
GA [auth b3] | PF00421 | e6k33b31 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
HA [auth b4] | PF00421 | e6k33b41 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
IA [auth b5] | PF00421 | e6k33b51 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
JA [auth b6] | PF00421 | e6k33b61 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
M [auth a1] | PF00421 | e6k33a11 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
N [auth a2] | PF00421 | e6k33a21 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
P [auth a4] | PF00421 | e6k33a41 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
Q [auth a5] | PF00421 | e6k33a51 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
R [auth a6] | PF00421 | e6k33a61 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
WA [auth c1] | PF00421 | e6k33c11 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
XA [auth c2] | PF00421 | e6k33c21 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
YA [auth c3] | PF00421 | e6k33c31 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
AB [auth c5] | PF00421 | e6k33c51 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
O [auth a3] | PF00421 | e6k33a31 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
ZA [auth c4] | PF00421 | e6k33c41 | A: alpha bundles | X: Photosystem II antenna protein-like (From Topology) | H: Photosystem II antenna protein-like (From Topology) | T: Photosystem II antenna protein-like | F: PF00421 | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
A [auth aA], KA [auth cA], S [auth bA] | PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family |
B [auth aB], LA [auth cB], T [auth bB] | PF00223 | Photosystem I psaA/psaB protein (PsaA_PsaB) | Photosystem I psaA/psaB protein | - | Family |
C [auth aC], MA [auth cC], U [auth bC] | PF12838 | 4Fe-4S dicluster domain (Fer4_7) | 4Fe-4S dicluster domain | Superfamily includes proteins containing domains which bind to iron-sulfur clusters. Members include bacterial ferredoxins, various dehydrogenases, and various reductases. Structure of the domain is an alpha-antiparallel beta sandwich. Domain contai ... | Domain |
D [auth aD], NA [auth cD], V [auth bD] | PF02531 | PsaD (PsaD) | PsaD | - | Family |
AA [auth bK], I [auth aK], SA [auth cK] | PF01241 | Photosystem I psaG / psaK (PSI_PSAK) | Photosystem I psaG / psaK | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Photosystems | Photosystem I |
Membrane Protein Annotation: mpstruc mpstruc Database Homepage
Chains | Resource Link | Group | Subgroup | Protein |
---|---|---|---|---|
mpstruc | TRANSMEMBRANE PROTEINS: ALPHA-HELICAL | Photosystem+Light-Harvesting Complex Supercomplex | Photosystem I-IsiA supercomplex |