Annotations: 6KIO

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
C [auth a]	SCOP2B Superfamily	Tubulin nucleotide-binding domain-like	8044257	3001758	SCOP2B (2022-06-29)
C [auth a]	SCOP2B Superfamily	Tubulin C-terminal domain-like	8036009	3001732	SCOP2B (2022-06-29)
A [auth b]	SCOP2B Superfamily	Tubulin C-terminal domain-like	8036011	3001732	SCOP2B (2022-06-29)
A [auth b]	SCOP2B Superfamily	Tubulin nucleotide-binding domain-like	8044258	3001758	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
C [auth a]	Tubulin_C	e6kioa1	A: a+b three layers	X: Bacillus chorismate mutase-like	H: Tubulin C-terminal domain-like (From Topology)	T: Tubulin C-terminal domain-like	F: Tubulin_C	ECOD (1.6)
C [auth a]	Tubulin	e6kioa2	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: Tubulin nucleotide-binding domain-like	F: Tubulin	ECOD (1.6)
B [auth M]	MT	e6kioM1	A: alpha bundles	X: Microtubule-Binding Domain of Flagellar Dynein (From Topology)	H: Microtubule-Binding Domain of Flagellar Dynein (From Topology)	T: Microtubule-Binding Domain of Flagellar Dynein	F: MT	ECOD (1.6)
A [auth b]	Tubulin_C	e6kiob2	A: a+b three layers	X: Bacillus chorismate mutase-like	H: Tubulin C-terminal domain-like (From Topology)	T: Tubulin C-terminal domain-like	F: Tubulin_C	ECOD (1.6)
A [auth b]	Tubulin	e6kiob1	A: a/b three-layered sandwiches	X: Rossmann-like	H: Rossmann-related	T: Tubulin nucleotide-binding domain-like	F: Tubulin	ECOD (1.6)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
C [auth a]	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
C [auth a]	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
C [auth a]	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)
A [auth b]	3.40.50.1440	Alpha Beta	3-Layer(aba) Sandwich	Rossmann fold	Tubulin/FtsZ, GTPase domain	CATH (utative)
A [auth b]	3.30.1330.20	Alpha Beta	2-Layer Sandwich	60s Ribosomal Protein L30	Chain: A	CATH (utative)
A [auth b]	1.10.287.600	Mainly Alpha	Orthogonal Bundle	Helix Hairpins	Helix hairpin bin	CATH (utative)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
B [auth M]	PF12777	Microtubule-binding stalk of dynein motor (MT)	Microtubule-binding stalk of dynein motor	the 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures describ ...	the 380 kDa motor unit of dynein belongs to the AAA class of chaperone-like ATPases. The core of the 380 kDa motor unit contains a concatenated chain of six AAA modules, of which four correspond to the ATP binding sites with P-loop signatures described previously, and two are modules in which the P loop has been lost in evolution. This family is the region between D4 and D5 and is the two predicted alpha-helical coiled coil segments that form the stalk supporting the ATP-sensitive microtubule binding component [1].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
C [auth a]	Tubulin alpha-1A chain	structural constituent of cytoskeleton structural molecule activity hydrolase activity catalytic activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding structural constituent of cytoskeleton structural molecule activity hydrolase activity catalytic activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding metal ion binding	cellular process cell cycle mitotic cell cycle cellular component organization organelle organization microtubule cytoskeleton organization microtubule-based process cellular component organization or biogenesis cytoskeleton organization	cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle cell projection organelle cilium motile cilium plasma membrane bounded cell projection polymeric cytoskeletal fiber intracellular membraneless organelle intracellular organelle cytoskeleton membraneless organelle cellular anatomical structure intracellular anatomical structure cytoplasm membrane-bounded organelle cell projection organelle cilium motile cilium plasma membrane bounded cell projection polymeric cytoskeletal fiber intracellular membraneless organelle intracellular organelle cytoskeleton membraneless organelle supramolecular fiber microtubule supramolecular polymer supramolecular complex microtubule cytoskeleton
B [auth M]	Dynein heavy chain, cytoplasmic	binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding binding adenyl ribonucleotide binding nucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding adenyl nucleotide binding ATP binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding dynein light intermediate chain binding protein binding microtubule motor activity polypeptide conformation or assembly isomerase activity isomerase activity cytoskeletal motor activity minus-end-directed microtubule motor activity macromolecular conformation isomerase activity catalytic activity ATP-dependent activity pyrophosphatase activity ATP hydrolysis activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides dynein intermediate chain binding	establishment of organelle localization cellular localization organelle transport along microtubule transport nucleus localization intracellular transport establishment of localization localization organelle localization establishment of localization in cell nuclear migration along microtubule microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport establishment of organelle localization cellular localization organelle transport along microtubule transport nucleus localization intracellular transport establishment of localization localization organelle localization establishment of localization in cell nuclear migration along microtubule microtubule-based transport transport along microtubule cytoskeleton-dependent intracellular transport cellular process microtubule-based movement microtubule-based process nuclear migration organelle fusion cellular component organization organelle organization nucleus organization karyogamy cellular component organization or biogenesis microtubule cytoskeleton organization spindle localization mitotic cell cycle establishment of mitotic spindle localization mitotic cell cycle process establishment of spindle localization cell cycle microtubule cytoskeleton organization involved in mitosis cytoskeleton organization cell cycle process mitotic nuclear division organelle fission chromosome organization sister chromatid segregation nuclear division mitotic sister chromatid segregation nuclear chromosome segregation chromosome segregation cytoplasmic microtubule organization supramolecular fiber organization establishment or maintenance of cell polarity establishment of spindle orientation establishment of cell polarity establishment of mitotic spindle orientation mitotic spindle organization spindle organization	cell periphery cell cortex cellular anatomical structure intracellular anatomical structure cytoplasm polymeric cytoskeletal fiber spindle aster astral microtubule intracellular membraneless organelle spindle microtubule cytoplasmic microtubule intracellular organelle cytoskeleton cell periphery cell cortex cellular anatomical structure intracellular anatomical structure cytoplasm polymeric cytoskeletal fiber spindle aster astral microtubule intracellular membraneless organelle spindle microtubule cytoplasmic microtubule intracellular organelle cytoskeleton organelle membraneless organelle supramolecular fiber microtubule supramolecular polymer supramolecular complex microtubule cytoskeleton microtubule organizing center spindle pole body protein-containing complex cytoplasmic dynein complex catalytic complex dynein complex microtubule associated complex
A [auth b]	Tubulin beta chain	structural constituent of cytoskeleton structural molecule activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding structural constituent of cytoskeleton structural molecule activity binding guanyl nucleotide binding GTP binding nucleotide binding guanyl ribonucleotide binding purine ribonucleotide binding purine ribonucleoside triphosphate binding nucleoside phosphate binding ion binding purine nucleotide binding anion binding heterocyclic compound binding carbohydrate derivative binding ribonucleotide binding small molecule binding cation binding metal ion binding pyrophosphatase activity GTPase activity ribonucleoside triphosphate phosphatase activity hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides hydrolase activity hydrolase activity, acting on acid anhydrides catalytic activity	cellular process cell cycle mitotic cell cycle cellular component organization organelle organization microtubule cytoskeleton organization microtubule-based process cellular component organization or biogenesis cytoskeleton organization developmental process multicellular organismal process neuron migration cellular developmental process nervous system development cellular process cell cycle mitotic cell cycle cellular component organization organelle organization microtubule cytoskeleton organization microtubule-based process cellular component organization or biogenesis cytoskeleton organization developmental process multicellular organismal process neuron migration cellular developmental process nervous system development generation of neurons neurogenesis multicellular organism development cell differentiation anatomical structure development cell migration cell motility system development	cellular anatomical structure intracellular anatomical structure cytoplasm polymeric cytoskeletal fiber intracellular membraneless organelle intracellular organelle cytoskeleton organelle membraneless organelle supramolecular fiber microtubule supramolecular polymer supramolecular complex microtubule cytoskeleton

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth a]	IPR003008	Tubulin/FtsZ, GTPase domain	Domain
C [auth a]	IPR008280	Tubulin/FtsZ, C-terminal	Homologous Superfamily
C [auth a]	IPR037103	Tubulin/FtsZ-like, C-terminal domain	Homologous Superfamily
C [auth a]	IPR017975	Tubulin, conserved site	Conserved Site
C [auth a]	IPR002452	Alpha tubulin	Family
C [auth a]	IPR000217	Tubulin	Family
C [auth a]	IPR023123	Tubulin, C-terminal	Homologous Superfamily
C [auth a]	IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	Domain
C [auth a]	IPR036525	Tubulin/FtsZ, GTPase domain superfamily	Homologous Superfamily
B [auth M]	IPR026983	Dynein heavy chain	Family
B [auth M]	IPR013602	Dynein heavy chain, linker	Domain
B [auth M]	IPR035706	Dynein heavy chain, ATP-binding dynein motor region	Domain
B [auth M]	IPR054354	Dynein 2 heavy chain 1, cytoplasmic, ATPase lid domain	Domain
B [auth M]	IPR003593	AAA+ ATPase domain	Domain
B [auth M]	IPR041658	Dynein heavy chain AAA lid domain	Domain
B [auth M]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
B [auth M]	IPR042228	Dynein heavy chain, linker, subdomain 3	Homologous Superfamily
B [auth M]	IPR035699	Dynein heavy chain, hydrolytic ATP-binding dynein motor region	Domain
B [auth M]	IPR042219	Dynein heavy chain AAA lid domain superfamily	Homologous Superfamily
B [auth M]	IPR024743	Dynein heavy chain, coiled coil stalk	Domain
B [auth M]	IPR013594	Dynein heavy chain, tail	Domain
B [auth M]	IPR048404	DYN1, AAA+ ATPase lid domain	Domain
B [auth M]	IPR043157	Dynein heavy chain, AAA1 domain, small subdomain	Homologous Superfamily
B [auth M]	IPR042222	Dynein heavy chain, domain 2, N-terminal	Homologous Superfamily
B [auth M]	IPR004273	Dynein heavy chain region D6 P-loop domain	Domain
B [auth M]	IPR024317	Dynein heavy chain, AAA module D4	Domain
A [auth b]	IPR003008	Tubulin/FtsZ, GTPase domain	Domain
A [auth b]	IPR008280	Tubulin/FtsZ, C-terminal	Homologous Superfamily
A [auth b]	IPR037103	Tubulin/FtsZ-like, C-terminal domain	Homologous Superfamily
A [auth b]	IPR017975	Tubulin, conserved site	Conserved Site
A [auth b]	IPR000217	Tubulin	Family
A [auth b]	IPR023123	Tubulin, C-terminal	Homologous Superfamily
A [auth b]	IPR002453	Beta tubulin	Family
A [auth b]	IPR013838	Beta tubulin, autoregulation binding site	Binding Site
A [auth b]	IPR018316	Tubulin/FtsZ, 2-layer sandwich domain	Domain
A [auth b]	IPR036525	Tubulin/FtsZ, GTPase domain superfamily	Homologous Superfamily