6LS9
Crystal structure of bovine herpesvirus 1 glycoprotein D
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| A | Herpes_glycop_D | e6ls9A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Herpes_glycop_D | ECOD (1.6) |
| B | Herpes_glycop_D | e6ls9B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Herpes_glycop_D | ECOD (1.6) |
| C | Herpes_glycop_D | e6ls9C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: Herpes_glycop_D | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| A | 2.70.230.10 | Mainly Beta | Distorted Sandwich | Glycoprotein D | Chain: A | CATH (utative) |
| B | 2.70.230.10 | Mainly Beta | Distorted Sandwich | Glycoprotein D | Chain: A | CATH (utative) |
| C | 2.70.230.10 | Mainly Beta | Distorted Sandwich | Glycoprotein D | Chain: A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF01537 | Herpesvirus glycoprotein D/GG/GX domain (Herpes_glycop_D) | Herpesvirus glycoprotein D/GG/GX domain | This domain is found in several Herpes viruses glycoproteins. This is a family includes glycoprotein-D (gD or gIV) which is common to herpes simplex virus types 1 and 2, as well as equine herpes, bovine herpes and Marek's disease virus. Glycoprotein- ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
| Chains | Polymer | Molecular Function | Biological Process | Cellular Component |
|---|---|---|---|---|
| Envelope glycoprotein D | - | - |
InterPro: Protein Family Classification InterPro Database Homepage
| Chains | Accession | Name | Type |
|---|---|---|---|
| IPR036179 | Immunoglobulin-like domain superfamily | Homologous Superfamily | |
| IPR002896 | Herpesvirus glycoprotein D/GG/GX domain | Domain |
