Active state Dot1L bound to the H2B-Ubiquitinated nucleosome, 2-to-1 complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| N | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
| L | SCOP2B Superfamily | Ubiquitin-like | 8101457 | 3000157 | SCOP2B (2022-06-29) |
| M | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8033656 | 3000118 | SCOP2B (2022-06-29) |
| K | SCOP2B Superfamily | S-adenosyl-L-methionine-dependent methyltransferases | 8033656 | 3000118 | SCOP2B (2022-06-29) |
| D | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
| H | SCOP2B Superfamily | Core histone-like | 8041279 | 3001387 | SCOP2B (2022-06-29) |
| C | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
| G | SCOP2B Superfamily | Core histone-like | 8041278 | 3001387 | SCOP2B (2022-06-29) |
| B | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
| F | SCOP2B Superfamily | Core histone-like | 8042439 | 3001387 | SCOP2B (2022-06-29) |
| A | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
| E | SCOP2B Superfamily | Core histone-like | 8041272 | 3001387 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| L | EFG_III | e6nj9L1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EFG_III | ECOD (v294.1) |
| K | EFG_III | e6nj9K1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EFG_III | ECOD (v294.1) |
| D | NTP_transf_2 | e6nj9D1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: NTP_transf_2 | ECOD (v294.1) |
| H | NTP_transf_2 | e6nj9H1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: NTP_transf_2 | ECOD (v294.1) |
| C | NTP_transf_2 | e6nj9C1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: NTP_transf_2 | ECOD (v294.1) |
| G | EFG_III | e6nj9G1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EFG_III | ECOD (v294.1) |
| B | NTP_transf_2 | e6nj9B1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: NTP_transf_2 | ECOD (v294.1) |
| F | EFG_III | e6nj9F1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EFG_III | ECOD (v294.1) |
| A | NTP_transf_2 | e6nj9A1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: NTP_transf_2 | ECOD (v294.1) |
| E | EFG_III | e6nj9E1 | A: a/b three-layered sandwiches | X: PriB N-terminal domain-like | H: Aconitase iron-sulfur domain | T: Aconitase iron-sulfur domain | F: EFG_III | ECOD (v294.1) |
Domain Annotation: CATH CATH Database Homepage
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| PF00240 | Ubiquitin family (ubiquitin) | Ubiquitin family | This family contains a number of ubiquitin-like proteins: SUMO (smt3 homologue) (see Swiss:Q02724), Nedd8 (see Swiss:P29595), Elongin B (see Swiss:Q15370), Rub1 (see Swiss:Q9SHE7), and Parkin (see Swiss:O60260). A number of them are thought to carry ... | Domain | |
| PF08123 | Histone methylation protein DOT1 (DOT1) | Histone methylation protein DOT1 | The DOT1 domain regulates gene expression by methylating histone H3 [1]. H3 methylation by DOT1 has been shown to be required for the DNA damage checkpoint in yeast [2]. | Domain | |
| PF16211 | C-terminus of histone H2A (Histone_H2A_C) | C-terminus of histone H2A | - | Family | |
| PF15511 | Centromere kinetochore component CENP-T histone fold (CENP-T_C) | Centromere kinetochore component CENP-T histone fold | CENP-T is a family of vertebral kinetochore proteins that associates directly with CENP-W. The N-terminus of CENP-T proteins interacts directly with the Ndc80 complex in the outer kinetochore. Importantly, the CENP-T-W complex does not directly asso ... | Domain | |
| PF00125 | Core histone H2A/H2B/H3/H4 domain (Histone) | Core histone H2A/H2B/H3/H4 domain | Domain |














