6OFH
Structure of Salmonella type III secretion system needle filament
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
A [auth D] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
B [auth U] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
C [auth V] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
D [auth E] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
E [auth F] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
F [auth G] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
H [auth I] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
I [auth J] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
K [auth L] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
M [auth N] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
P [auth Q] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
R [auth S] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
S [auth T] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
G [auth H] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
J [auth K] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
L [auth M] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
N [auth O] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
O [auth P] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
Q [auth R] | SCOP2B Superfamily | Type III secretion system needle-like | 8074333 | 3000649 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A [auth D] | T3SS_needle_F | e6ofhD1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
B [auth U] | T3SS_needle_F | e6ofhU1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
C [auth V] | T3SS_needle_F | e6ofhV1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
D [auth E] | T3SS_needle_F | e6ofhE1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
E [auth F] | T3SS_needle_F | e6ofhF1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
F [auth G] | T3SS_needle_F | e6ofhG1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
H [auth I] | T3SS_needle_F | e6ofhI1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
I [auth J] | T3SS_needle_F | e6ofhJ1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
K [auth L] | T3SS_needle_F | e6ofhL1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
M [auth N] | T3SS_needle_F | e6ofhN1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
P [auth Q] | T3SS_needle_F | e6ofhQ1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
R [auth S] | T3SS_needle_F | e6ofhS1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
S [auth T] | T3SS_needle_F | e6ofhT1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
G [auth H] | T3SS_needle_F | e6ofhH1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
J [auth K] | T3SS_needle_F | e6ofhK1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
L [auth M] | T3SS_needle_F | e6ofhM1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
N [auth O] | T3SS_needle_F | e6ofhO1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
O [auth P] | T3SS_needle_F | e6ofhP1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
Q [auth R] | T3SS_needle_F | e6ofhR1 | A: alpha bundles | X: Long alpha-hairpin | H: MxiH-like (From Topology) | T: MxiH-like | F: T3SS_needle_F | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF09392 | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF (T3SS_needle_F) | Type III secretion needle MxiH, YscF, SsaG, EprI, PscF, EscF | - | Family |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR037203 | Type III secretion, needle-protein-like superfamily | Homologous Superfamily | |
IPR021123 | Type III secretion, needle-protein-like | Family | |
IPR011841 | Type III secretion system, needle protein | Family |