6PBZ
Crystal structure of Escherichia coli GppA
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
A | PRK10854 | e6pbzA3 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: PRK10854 | ECOD (1.6) |
A | Ppx-GppA_N | e6pbzA2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ppx-GppA_N | ECOD (1.6) |
A | Ppx-GppA_C | e6pbzA1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ppx-GppA_C | ECOD (1.6) |
B | PRK10854 | e6pbzB1 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: PRK10854 | ECOD (1.6) |
B | Ppx-GppA_N | e6pbzB3 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ppx-GppA_N | ECOD (1.6) |
B | Ppx-GppA_C | e6pbzB2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ppx-GppA_C | ECOD (1.6) |
C | PRK10854 | e6pbzC3 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: PRK10854 | ECOD (1.6) |
C | Ppx-GppA_N | e6pbzC2 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ppx-GppA_N | ECOD (1.6) |
C | Ppx-GppA_C | e6pbzC1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ppx-GppA_C | ECOD (1.6) |
D | PRK10854 | e6pbzD2 | A: alpha complex topology | X: PDEase-like | H: HD-domain/PDEase-like (From Topology) | T: HD-domain/PDEase-like | F: PRK10854 | ECOD (1.6) |
D | Ppx-GppA_N | e6pbzD3 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ppx-GppA_N | ECOD (1.6) |
D | Ppx-GppA_C | e6pbzD1 | A: mixed a+b and a/b | X: Ribonuclease H-like | H: Ribonuclease H-like (From Topology) | T: Ribonuclease H-like | F: Ppx-GppA_C | ECOD (1.6) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF02541 | Ppx/GppA phosphatase family (Ppx-GppA) | Ppx/GppA phosphatase family | - | Family | |
PF21447 | Ppx/GppA phosphatase, domain III (Ppx-GppA_III) | Ppx/GppA phosphatase, domain III | Ppx/GppA phosphatases belong to ASKHA (acetate and sugar kinases, Hsp70, actin) which has an N-terminal (Pfam:PF02541) nucleotide-binding domain (domains I/II), domain III which corresponds to the catalytic phosphohydrolase domain with the common hel ... | Domain |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR050273 | GppA/Ppx guanosine pentaphosphate hydrolase | Family | |
IPR048950 | Ppx/GppA phosphatase, C-terminal | Domain | |
IPR030673 | Pyrophosphatase, GppA/Ppx-type | Family | |
IPR043129 | ATPase, nucleotide binding domain | Homologous Superfamily | |
IPR023709 | Guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase | Family | |
IPR003695 | Ppx/GppA phosphatase, N-terminal | Domain |