Annotations: 6RLP

Cryo-EM reconstruction of TMV coat protein

External Resource: Annotation

Domain Annotation: SCOP2 Classification
Domain Annotation: ECOD Classification
Protein Family Annotation
Gene Ontology: Gene Product Annotation
InterPro: Protein Family Classification

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
Y [auth M]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
W [auth L]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
UA [auth Y]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
U [auth K]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
SA [auth X]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
S [auth J]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
QA [auth W]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
Q [auth I]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
OA [auth V]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
O [auth H]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
MA [auth U]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
M [auth G]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
KA [auth T]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
K [auth F]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
IA [auth S]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
I [auth E]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
GA [auth Q]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
G [auth D]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
EA [auth P]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
E [auth C]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
CA [auth O]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
C [auth B]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
AA [auth N]	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)
A	SCOP2B Superfamily	TMV-like viral coat proteins	8036917	3001587	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
Y [auth M]	COQ9	e6rlpM1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
W [auth L]	COQ9	e6rlpL1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
UA [auth Y]	COQ9	e6rlpY1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
U [auth K]	COQ9	e6rlpK1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
SA [auth X]	COQ9	e6rlpX1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
S [auth J]	COQ9	e6rlpJ1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
QA [auth W]	COQ9	e6rlpW1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
Q [auth I]	COQ9	e6rlpI1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
OA [auth V]	COQ9	e6rlpV1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
O [auth H]	COQ9	e6rlpH1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
MA [auth U]	COQ9	e6rlpU1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
M [auth G]	COQ9	e6rlpG1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
KA [auth T]	COQ9	e6rlpT1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
K [auth F]	COQ9	e6rlpF1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
IA [auth S]	COQ9	e6rlpS1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
I [auth E]	COQ9	e6rlpE1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
GA [auth Q]	COQ9	e6rlpQ1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
G [auth D]	COQ9	e6rlpD1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
EA [auth P]	COQ9	e6rlpP1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
E [auth C]	COQ9	e6rlpC1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
CA [auth O]	COQ9	e6rlpO1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
C [auth B]	COQ9	e6rlpB1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
AA [auth N]	COQ9	e6rlpN1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)
A	COQ9	e6rlpA1	A: alpha arrays	X: cradle loop barrel	H: Cytochrome P450	T: Cytochrome P450	F: COQ9	ECOD (v295)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
A, AA [auth N], C [auth B], CA [auth O], E [auth C], A, AA [auth N], C [auth B], CA [auth O], E [auth C], EA [auth P], G [auth D], GA [auth Q], I [auth E], IA [auth S], K [auth F], KA [auth T], M [auth G], MA [auth U], O [auth H], OA [auth V], Q [auth I], QA [auth W], S [auth J], SA [auth X], U [auth K], UA [auth Y], W [auth L], Y [auth M]	PF00721	Virus coat protein (TMV like) (TMV_coat)	Virus coat protein (TMV like)	-	Family

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
B [auth R], BA [auth l], D [auth Z], DA [auth m], F [auth a], B [auth R], BA [auth l], D [auth Z], DA [auth m], F [auth a], FA [auth n], H [auth b], HA [auth o], J [auth c], JA [auth p], L [auth d], LA [auth q], N [auth e], NA [auth r], P [auth f], PA [auth s], R [auth g], RA [auth t], T [auth h], TA [auth u], V [auth i], VA [auth v], X [auth j], Z [auth k]	RNA (5'-R(PGPAP*A)-3')	-	-	-
A, AA [auth N], C [auth B], CA [auth O], E [auth C], A, AA [auth N], C [auth B], CA [auth O], E [auth C], EA [auth P], G [auth D], GA [auth Q], I [auth E], IA [auth S], K [auth F], KA [auth T], M [auth G], MA [auth U], O [auth H], OA [auth V], Q [auth I], QA [auth W], S [auth J], SA [auth X], U [auth K], UA [auth Y], W [auth L], Y [auth M]	Capsid protein	structural molecule activity identical protein binding protein binding binding	-	viral capsid virion component helical viral capsid

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
A, AA [auth N], C [auth B], CA [auth O], E [auth C], A, AA [auth N], C [auth B], CA [auth O], E [auth C], EA [auth P], G [auth D], GA [auth Q], I [auth E], IA [auth S], K [auth F], KA [auth T], M [auth G], MA [auth U], O [auth H], OA [auth V], Q [auth I], QA [auth W], S [auth J], SA [auth X], U [auth K], UA [auth Y], W [auth L], Y [auth M]	IPR001337	Tobacco mosaic virus-like, coat protein	Family
A, AA [auth N], C [auth B], CA [auth O], E [auth C], A, AA [auth N], C [auth B], CA [auth O], E [auth C], EA [auth P], G [auth D], GA [auth Q], I [auth E], IA [auth S], K [auth F], KA [auth T], M [auth G], MA [auth U], O [auth H], OA [auth V], Q [auth I], QA [auth W], S [auth J], SA [auth X], U [auth K], UA [auth Y], W [auth L], Y [auth M]	IPR036417	Tobacco mosaic virus-like, coat protein superfamily	Homologous Superfamily