6WAS | pdb_00006was

Structure of D19.PA8 Fab in complex with 1FD6 16055 V1V2 scaffold


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
E [auth G]e6wasG1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF:ECOD (develop294)
F [auth J]Raptor_Ne6wasJ1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Raptor_NECOD (develop294)
D [auth B]Raptor_Ne6wasB1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Raptor_NECOD (develop294)
B [auth L]e6wasL1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF:ECOD (develop294)
A [auth H]e6wasH1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF:ECOD (develop294)
C [auth A]Raptor_Ne6wasA1 A: alpha bundlesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Raptor_NECOD (develop294)

SAbDab Antibody Annotation SAbDab Database Homepage

ChainChain ClassChain SubclassChain TypeAntigen Name(s) Provenance Source
B [auth L],
D [auth B]
Light ChainIGLV6 Lambda1fd6 16055 v1v2 scaffoldSAbDab (2026-03-20)
A [auth H],
C [auth A]
Heavy ChainIGHV3 -1fd6 16055 v1v2 scaffoldSAbDab (2026-03-20)

Protein Modification Annotation

Modified Residue(s)
ChainResidue(s)Description
B [auth L],
D [auth B]
PCA Parent Component: GLN

RESIDAA0031

PSI-MOD :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420
A [auth H],
C [auth A]
PCA Parent Component: GLN

RESIDAA0031 , AA0031

PSI-MOD :  2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420 , 2-pyrrolidone-5-carboxylic acid (Gln) MOD:00040 , 2-pyrrolidone-5-carboxylic acid (Glu) MOD:00420