Annotations: 6WM3

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
B [auth O]	SCOP2B Superfamily	Vacuolar ATP synthase subunit C	8101529	3001744	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
E [auth I]	vATP-synt_E_C	e6wm3I1	A: a+b two layers	X: FwdE/GAPDH domain-like	H: V-type ATPase subunit E (From Topology)	T: V-type ATPase subunit E	F: vATP-synt_E_C	ECOD (1.6)
E [auth I]	vATP-synt_E_N	e6wm3I2	A: extended segments	X: Helical region in V-type proton ATPase subunit E (From Topology)	H: Helical region in V-type proton ATPase subunit E (From Topology)	T: Helical region in V-type proton ATPase subunit E	F: vATP-synt_E_N	ECOD (1.6)
G [auth H]	vATP-synt_E_C	e6wm3H1	A: a+b two layers	X: FwdE/GAPDH domain-like	H: V-type ATPase subunit E (From Topology)	T: V-type ATPase subunit E	F: vATP-synt_E_C	ECOD (1.6)
G [auth H]	vATP-synt_E_N	e6wm3H2	A: extended segments	X: Helical region in V-type proton ATPase subunit E (From Topology)	H: Helical region in V-type proton ATPase subunit E (From Topology)	T: Helical region in V-type proton ATPase subunit E	F: vATP-synt_E_N	ECOD (1.6)
C [auth J]	vATP-synt_E_C	e6wm3J2	A: a+b two layers	X: FwdE/GAPDH domain-like	H: V-type ATPase subunit E (From Topology)	T: V-type ATPase subunit E	F: vATP-synt_E_C	ECOD (1.6)
C [auth J]	vATP-synt_E_N	e6wm3J1	A: extended segments	X: Helical region in V-type proton ATPase subunit E (From Topology)	H: Helical region in V-type proton ATPase subunit E (From Topology)	T: Helical region in V-type proton ATPase subunit E	F: vATP-synt_E_N	ECOD (1.6)
D [auth M]	V-ATPase_G	e6wm3M1	A: extended segments	X: V-type proton ATPase subunit G (From Topology)	H: V-type proton ATPase subunit G (From Topology)	T: V-type proton ATPase subunit G	F: V-ATPase_G	ECOD (1.6)
F [auth L]	V-ATPase_G	e6wm3L1	A: extended segments	X: V-type proton ATPase subunit G (From Topology)	H: V-type proton ATPase subunit G (From Topology)	T: V-type proton ATPase subunit G	F: V-ATPase_G	ECOD (1.6)
H [auth K]	V-ATPase_G	e6wm3K1	A: extended segments	X: V-type proton ATPase subunit G (From Topology)	H: V-type proton ATPase subunit G (From Topology)	T: V-type proton ATPase subunit G	F: V-ATPase_G	ECOD (1.6)
AA [auth F]	ATP-synt_ab_N	e6wm3F3	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: ATP-synt_ab_N	ECOD (1.6)
AA [auth F]	ATP-synt_ab_C	e6wm3F1	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: ATP-synt_ab_C	ECOD (1.6)
AA [auth F]	ATP-synt_ab	e6wm3F2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
BA [auth D]	ATP-synt_ab_N	e6wm3D3	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: ATP-synt_ab_N	ECOD (1.6)
BA [auth D]	ATP-synt_ab_C	e6wm3D2	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: ATP-synt_ab_C	ECOD (1.6)
BA [auth D]	ATP-synt_ab	e6wm3D1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
CA [auth E]	ATP-synt_ab_N	e6wm3E3	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: ATP-synt_ab_N	ECOD (1.6)
CA [auth E]	ATP-synt_ab_C	e6wm3E1	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: ATP-synt_ab_C	ECOD (1.6)
CA [auth E]	ATP-synt_ab	e6wm3E2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
DA [auth Z]	F_UNCLASSIFIED	e6wm3Z1	A: alpha superhelices	X: Effector protein SidK (From Topology)	H: Effector protein SidK (From Topology)	T: Effector protein SidK	F: F_UNCLASSIFIED	ECOD (1.6)
EA [auth X]	F_UNCLASSIFIED	e6wm3X1	A: alpha superhelices	X: Effector protein SidK (From Topology)	H: Effector protein SidK (From Topology)	T: Effector protein SidK	F: F_UNCLASSIFIED	ECOD (1.6)
FA [auth Y]	F_UNCLASSIFIED	e6wm3Y1	A: alpha superhelices	X: Effector protein SidK (From Topology)	H: Effector protein SidK (From Topology)	T: Effector protein SidK	F: F_UNCLASSIFIED	ECOD (1.6)
N [auth 1]	ATP-synt_C	e6wm312	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: ATP-synt_C	ECOD (1.6)
O [auth 2]	ATP-synt_C	e6wm322	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: ATP-synt_C	ECOD (1.6)
P [auth 3]	ATP-synt_C	e6wm331	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: ATP-synt_C	ECOD (1.6)
Q [auth 4]	ATP-synt_C	e6wm341	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: ATP-synt_C	ECOD (1.6)
R [auth 5]	ATP-synt_C	e6wm351	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: ATP-synt_C	ECOD (1.6)
S [auth 6]	ATP-synt_C	e6wm362	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: ATP-synt_C	ECOD (1.6)
T [auth 7]	ATP-synt_C	e6wm371	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: ATP-synt_C	ECOD (1.6)
U [auth 8]	ATP-synt_C	e6wm382	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: ATP-synt_C	ECOD (1.6)
V [auth 9]	ATP-synt_C	e6wm391	A: extended segments	X: F1F0 ATP synthase subunit C (From Topology)	H: F1F0 ATP synthase subunit C (From Topology)	T: F1F0 ATP synthase subunit C	F: ATP-synt_C	ECOD (1.6)
W [auth Q]	vATP-synt_AC39_3rd	e6wm3Q2	A: alpha bundles	X: V-type ATP synthase subunit C	H: V-type ATP synthase subunit C (From Topology)	T: V-type ATP synthase subunit C	F: vATP-synt_AC39_3rd	ECOD (1.6)
W [auth Q]	vATP-synt_AC39_1st	e6wm3Q1	A: alpha bundles	X: V-type ATP synthase subunit C	H: V-type ATP synthase subunit C (From Topology)	T: V-type ATP synthase subunit C	F: vATP-synt_AC39_1st	ECOD (1.6)
X [auth C]	ATP-synt_ab_N	e6wm3C2	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: ATP-synt_ab_N	ECOD (1.6)
X [auth C]	ATP-synt_ab_C	e6wm3C4	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: ATP-synt_ab_C	ECOD (1.6)
X [auth C]	ATP-synt_ab_Xtn	e6wm3C3	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Single hybrid motif	F: ATP-synt_ab_Xtn	ECOD (1.6)
X [auth C]	ATP-synt_ab	e6wm3C1	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
Y [auth A]	ATP-synt_ab_N	e6wm3A1	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: ATP-synt_ab_N	ECOD (1.6)
Y [auth A]	ATP-synt_ab_C	e6wm3A3	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: ATP-synt_ab_C	ECOD (1.6)
Y [auth A]	ATP-synt_ab_Xtn	e6wm3A4	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Single hybrid motif	F: ATP-synt_ab_Xtn	ECOD (1.6)
Y [auth A]	ATP-synt_ab	e6wm3A2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
Z [auth B]	ATP-synt_ab_N	e6wm3B3	A: beta barrels	X: cradle loop barrel	H: RIFT-related	T: Alanine racemase-C	F: ATP-synt_ab_N	ECOD (1.6)
Z [auth B]	ATP-synt_ab_C	e6wm3B4	A: alpha superhelices	X: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	H: C-terminal domain of alpha and beta subunits of F1 ATP synthase (From Topology)	T: C-terminal domain of alpha and beta subunits of F1 ATP synthase	F: ATP-synt_ab_C	ECOD (1.6)
Z [auth B]	ATP-synt_ab_Xtn	e6wm3B1	A: a+b complex topology	X: alpha/beta-Hammerhead/Barrel-sandwich hybrid	H: alpha/beta-Hammerhead/Barrel-sandwich hybrid	T: Single hybrid motif	F: ATP-synt_ab_Xtn	ECOD (1.6)
Z [auth B]	ATP-synt_ab	e6wm3B2	A: a/b three-layered sandwiches	X: P-loop domains-like	H: P-loop domains-related	T: P-loop containing nucleoside triphosphate hydrolases	F: ATP-synt_ab	ECOD (1.6)
GA [auth G]	ATP-synt_D	e6wm3G1	A: alpha bundles	X: V-type proton ATPase subunit D (From Topology)	H: V-type proton ATPase subunit D (From Topology)	T: V-type proton ATPase subunit D	F: ATP-synt_D	ECOD (1.6)
HA [auth N]	ATP-synt_F	e6wm3N1	A: a/b three-layered sandwiches	X: Flavodoxin-like	H: AtpF-like (From Topology)	T: AtpF-like	F: ATP-synt_F	ECOD (1.6)
IA [auth P]	V-ATPase_H_C	e6wm3P1	A: alpha superhelices	X: Repetitive alpha hairpins	H: ARM repeat (From Topology)	T: ARM repeat	F: V-ATPase_H_C	ECOD (1.6)
B [auth O]	V-ATPase_C_1st	e6wm3O1	A: alpha bundles	X: helical bundle domain in vacuolar ATP synthase subunit C (From Topology)	H: helical bundle domain in vacuolar ATP synthase subunit C (From Topology)	T: helical bundle domain in vacuolar ATP synthase subunit C	F: V-ATPase_C_1st	ECOD (1.6)
B [auth O]	V-ATPase_C_3rd	e6wm3O3	A: a+b two layers	X: Alpha-beta plaits	H: ferredoxin-like domain in vacuolar ATP synthase subunit C (From Topology)	T: ferredoxin-like domain in vacuolar ATP synthase subunit C	F: V-ATPase_C_3rd	ECOD (1.6)
B [auth O]	V-ATPase_C_2nd	e6wm3O2	A: a+b two layers	X: Alpha-beta plaits	H: ferredoxin-like domain in vacuolar ATP synthase subunit C (From Topology)	T: ferredoxin-like domain in vacuolar ATP synthase subunit C	F: V-ATPase_C_2nd	ECOD (1.6)

Protein Family Annotation Pfam Database Homepage

Chains	Accession	Name	Description	Comments	Source
C [auth J], E [auth I], G [auth H]	PF01991	ATP synthase (E/31 kDa) subunit (vATP-synt_E)	ATP synthase (E/31 kDa) subunit	-	Family
D [auth M], F [auth L], H [auth K]	PF03179	Vacuolar (H+)-ATPase G subunit (V-ATPase_G)	Vacuolar (H+)-ATPase G subunit	-	Coiled-coil
AA [auth F], BA [auth D], CA [auth E]	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)	ATP synthase alpha/beta family, nucleotide-binding domain	This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.	Domain
AA [auth F], BA [auth D], CA [auth E]	PF22919	C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)	C-terminal domain of V and A type ATP synthase	This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.	Domain
AA [auth F], BA [auth D], CA [auth E]	PF02874	ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)	ATP synthase alpha/beta family, beta-barrel domain	This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.	Domain
A [auth R]	PF01496	V-type ATPase 116kDa subunit family (V_ATPase_I)	V-type ATPase 116kDa subunit family	-	Family
N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], S [auth 6], T [auth 7], U [auth 8], V [auth 9]	PF00137	ATP synthase subunit C (ATP-synt_C)	ATP synthase subunit C	This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].	Domain
W [auth Q]	PF01992	ATP synthase (C/AC39) subunit (vATP-synt_AC39)	ATP synthase (C/AC39) subunit	-	Family
X [auth C], Y [auth A], Z [auth B]	PF00006	ATP synthase alpha/beta family, nucleotide-binding domain (ATP-synt_ab)	ATP synthase alpha/beta family, nucleotide-binding domain	This entry includes the ATP synthase alpha and beta subunits, the ATP synthase associated with flagella and the termination factor Rho.	Domain
X [auth C], Y [auth A], Z [auth B]	PF22919	C-terminal domain of V and A type ATP synthase (ATP-synt_VA_C)	C-terminal domain of V and A type ATP synthase	This entry represents a small alpha helical domain found at the C-terminus of a variety of ATP synthases.	Domain
X [auth C], Y [auth A], Z [auth B]	PF16886	ATPsynthase alpha/beta subunit N-term extension (ATP-synt_ab_Xtn)	ATPsynthase alpha/beta subunit N-term extension	-	Family
X [auth C], Y [auth A], Z [auth B]	PF02874	ATP synthase alpha/beta family, beta-barrel domain (ATP-synt_ab_N)	ATP synthase alpha/beta family, beta-barrel domain	This family includes the ATP synthase alpha and beta subunits the ATP synthase associated with flagella.	Domain
GA [auth G]	PF01813	ATP synthase subunit D (ATP-synt_D)	ATP synthase subunit D	-	Family
HA [auth N]	PF01990	ATP synthase (F/14-kDa) subunit (ATP-synt_F)	ATP synthase (F/14-kDa) subunit	-	Family
IA [auth P]	PF11698	V-ATPase subunit H (V-ATPase_H_C)	V-ATPase subunit H	-	Repeat
IA [auth P]	PF03224	V-ATPase subunit H (V-ATPase_H_N)	V-ATPase subunit H	-	Repeat
B [auth O]	PF03223	V-ATPase subunit C (V-ATPase_C)	V-ATPase subunit C	-	Family
I [auth S]	PF05493	ATP synthase subunit H (ATP_synt_H)	ATP synthase subunit H	-	Family
K [auth U]	PF05827	V-type proton ATPase subunit S1, luminal domain (VAS1_LD)	V-type proton ATPase subunit S1, luminal domain	This entry represents the luminal domain (LD) found in eukaryotic V-type proton ATPase subunit S1 involved in V-ATPase V0 assembly, including Ac45 subunit (ATP6AP1) [1,2]. This domain folds as a globular beta-prism structure which is structurally sim ...	This entry represents the luminal domain (LD) found in eukaryotic V-type proton ATPase subunit S1 involved in V-ATPase V0 assembly, including Ac45 subunit (ATP6AP1) [1,2]. This domain folds as a globular beta-prism structure which is structurally similar to LAMP1-3, thus, the LD domain of Ac45 is an evolutionarily conserved member of the LAMP family [2]. Ac45 is an ER membrane protein that guides the V-type ATPase into specialised subcellular compartments [3] and is critical for Vo complex assembly as it connects to multiple Vo subunits and phospholipids in the c-ring [2]. Missense mutations in the X-linked ATP6AP1 gene cause immunodeficiency in males that leads to recurrent bacterial infection, hepatopathy, cognitive impairment, and abnormal protein glycosylation [2].	Domain
K [auth U]	PF20520	V0 complex accessory subunit Ac45/VOA1 transmembrane domain (Ac45-VOA1_TM)	V0 complex accessory subunit Ac45/VOA1 transmembrane domain	This entry represents the transmembrane domain from ER/Golgi membrane proteins including V0 complex accessory subunit Ac45 (ATP6AP1, also known as V-type proton ATPase subunit S1) from animals and the yeast homologue V0 assembly protein 1 (VOA1) whic ...	This entry represents the transmembrane domain from ER/Golgi membrane proteins including V0 complex accessory subunit Ac45 (ATP6AP1, also known as V-type proton ATPase subunit S1) from animals and the yeast homologue V0 assembly protein 1 (VOA1) which are essential for V0 ATPase assembly, stability and function [1,2]. In humans, mutations of ATP6AP1 cause immunodeficiency with hypogammaglobulinemia, hepatopathy and neurocognitive abnormalities [3]. This entry also includes ER membrane BIG1 proteins from yeast, involved in cell wall biogenesis.	Domain
M [auth 0]	PF00137	ATP synthase subunit C (ATP-synt_C)	ATP synthase subunit C	This domain is found in the subunit c of ATP synthases and similar sequences from all cellular organisms. It forms two alpha-helices [1-4].	Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
C [auth J], E [auth I], G [auth H]	IPR038495	V-type ATPase subunit E, C-terminal domain superfamily	Homologous Superfamily
C [auth J], E [auth I], G [auth H]	IPR002842	V-type ATPase subunit E	Family
D [auth M], F [auth L], H [auth K]	IPR005124	Vacuolar (H+)-ATPase G subunit	Family
J [auth T]	IPR026770	Ribonuclease kappa	Family
AA [auth F], BA [auth D], CA [auth E]	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Domain
AA [auth F], BA [auth D], CA [auth E]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
AA [auth F], BA [auth D], CA [auth E]	IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	Domain
AA [auth F], BA [auth D], CA [auth E]	IPR005723	ATPase, V1 complex, subunit B	Family
AA [auth F], BA [auth D], CA [auth E]	IPR022879	V-type ATP synthase regulatory subunit B/beta	Family
AA [auth F], BA [auth D], CA [auth E]	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Active Site
A [auth R]	IPR026028	ATPase, V0 complex, subunit 116kDa, eukaryotic	Family
A [auth R]	IPR002490	V-type ATPase, V0 complex, 116kDa subunit family	Family
N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], S [auth 6], T [auth 7], U [auth 8], V [auth 9]	IPR011555	V-ATPase proteolipid subunit C, eukaryotic	Family
N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], S [auth 6], T [auth 7], U [auth 8], V [auth 9]	IPR035921	F/V-ATP synthase subunit C superfamily	Homologous Superfamily
N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], S [auth 6], T [auth 7], U [auth 8], V [auth 9]	IPR002379	V-ATPase proteolipid subunit C-like domain	Domain
N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], S [auth 6], T [auth 7], U [auth 8], V [auth 9]	IPR000245	V-ATPase proteolipid subunit	Family
W [auth Q]	IPR036079	V-type ATP synthase subunit c/d subunit superfamily	Homologous Superfamily
W [auth Q]	IPR035067	V-type ATPase subunit C/d	Homologous Superfamily
W [auth Q]	IPR044911	V-type ATP synthase c/d subunit, domain 3 superfamily	Homologous Superfamily
W [auth Q]	IPR002843	ATPase, V0 complex, c/d subunit	Family
W [auth Q]	IPR016727	ATPase, V0 complex, subunit d	Family
X [auth C], Y [auth A], Z [auth B]	IPR022878	V-type ATP synthase catalytic alpha chain	Family
X [auth C], Y [auth A], Z [auth B]	IPR024034	ATPase, F1/V1 complex, beta/alpha subunit, C-terminal	Homologous Superfamily
X [auth C], Y [auth A], Z [auth B]	IPR036121	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain superfamily	Homologous Superfamily
X [auth C], Y [auth A], Z [auth B]	IPR000194	ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain	Domain
X [auth C], Y [auth A], Z [auth B]	IPR005725	ATPase, V1 complex, subunit A	Family
X [auth C], Y [auth A], Z [auth B]	IPR027417	P-loop containing nucleoside triphosphate hydrolase	Homologous Superfamily
X [auth C], Y [auth A], Z [auth B]	IPR004100	ATPase, F1/V1/A1 complex, alpha/beta subunit, N-terminal domain	Domain
X [auth C], Y [auth A], Z [auth B]	IPR031686	ATPsynthase alpha/beta subunit, N-terminal extension	Domain
X [auth C], Y [auth A], Z [auth B]	IPR023366	ATP synthase subunit alpha, N-terminal domain-like superfamily	Homologous Superfamily
X [auth C], Y [auth A], Z [auth B]	IPR020003	ATPase, alpha/beta subunit, nucleotide-binding domain, active site	Active Site
GA [auth G]	IPR002699	ATPase, V1 complex, subunit D	Family
HA [auth N]	IPR008218	ATPase, V1 complex, subunit F	Family
HA [auth N]	IPR036906	ATPase, V1 complex, subunit F superfamily	Homologous Superfamily
HA [auth N]	IPR005772	ATPase, V1 complex, subunit F, eukaryotic	Family
IA [auth P]	IPR004908	ATPase, V1 complex, subunit H	Family
IA [auth P]	IPR016024	Armadillo-type fold	Homologous Superfamily
IA [auth P]	IPR011989	Armadillo-like helical	Homologous Superfamily
IA [auth P]	IPR038497	ATPase, V1 complex, subunit H, C-terminal domain superfamily	Homologous Superfamily
IA [auth P]	IPR011987	ATPase, V1 complex, subunit H, C-terminal	Domain
B [auth O]	IPR036132	Vacuolar ATP synthase subunit C superfamily	Homologous Superfamily
B [auth O]	IPR004907	ATPase, V1 complex, subunit C	Family
I [auth S]	IPR017385	ATPase, V0 complex, subunit e1/e2, metazoa	Family
I [auth S]	IPR008389	ATPase, V0 complex, subunit e1/e2	Family
K [auth U]	IPR046755	V-type proton ATPase subunit S1, luminal domain	Domain
K [auth U]	IPR008388	V0 complex accessory subunit Ac45	Family
K [auth U]	IPR046756	V-type proton ATPase subunit S1/VOA1, transmembrane domain	Domain
L [auth V]	IPR012493	Renin receptor-like	Family
M [auth 0]	IPR035921	F/V-ATP synthase subunit C superfamily	Homologous Superfamily
M [auth 0]	IPR002379	V-ATPase proteolipid subunit C-like domain	Domain
M [auth 0]	IPR000245	V-ATPase proteolipid subunit	Family

Pharos: Disease Associations Pharos Homepage Annotation

Chains	Drug Target	Associated Disease
C [auth J], E [auth I], G [auth H]	Pharos: P36543	autosomal recessive cutis laxa type 2C astrocytic tumor colorectal cancer CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IIC large cell medulloblastoma medulloblastoma Pick disease atypical teratoid rhabdoid tumor cutis laxa malignant ependymoma oligodendroglioma primitive neuroectodermal tumor glioblastoma malignant glioma ovarian cancer
D [auth M], F [auth L], H [auth K]	Pharos: O75348	astrocytic tumor ovarian cancer Parkinson disease subependymal giant cell astrocytoma oligodendroglioma pancreatic ductal adenocarcinoma plasma cell myeloma osteosarcoma pancreatic intraductal papillary-mucinous neoplasm psoriasis
AA [auth F], BA [auth D], CA [auth E]	Pharos: P21281	Zimmermann-Laband syndrome 2 autosomal dominant deafness - onychodystrophy syndrome Zimmermann-Laband syndrome follicular lymphoma oligodendroglioma Osteoarthrosis Deformans primitive neuroectodermal tumor astrocytic tumor glioblastoma intellectual disability malignant pancreatic neoplasm osteoarthritis ovarian cancer atypical teratoid rhabdoid tumor exocrine pancreatic carcinoma Zimmermann-Laband syndrome 2 autosomal dominant deafness - onychodystrophy syndrome Zimmermann-Laband syndrome follicular lymphoma oligodendroglioma Osteoarthrosis Deformans primitive neuroectodermal tumor astrocytic tumor glioblastoma intellectual disability malignant pancreatic neoplasm osteoarthritis ovarian cancer atypical teratoid rhabdoid tumor exocrine pancreatic carcinoma hepatocellular carcinoma lung cancer medulloblastoma osteoarthritis susceptibility 1 Pick disease Zimmermann-Laband syndrome 1 IgA glomerulonephritis malignant ependymoma
A [auth R]	Pharos: Q93050	Crohn disease lung carcinoma MALT lymphoma oligodendroglioma psoriasis glioblastoma malignant ependymoma medulloblastoma osteosarcoma subependymal giant cell astrocytoma inflammatory bowel disease malignant glioma metabolic syndrome X Pick disease ulcerative colitis
W [auth Q]	Pharos: P61421	diabetes mellitus ovarian cancer psoriasis
X [auth C], Y [auth A], Z [auth B]	Pharos: P38606	autosomal recessive cutis laxa type 2D Pick disease astrocytic tumor bipolar disorder CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IIC epilepsy glioblastoma medulloblastoma osteosarcoma psoriasis atypical teratoid rhabdoid tumor cutis laxa epileptic encephalopathy, infantile or early childhood, 3 lung carcinoma myopathy autosomal recessive cutis laxa type 2D Pick disease astrocytic tumor bipolar disorder CUTIS LAXA, AUTOSOMAL RECESSIVE, TYPE IIC epilepsy glioblastoma medulloblastoma osteosarcoma psoriasis atypical teratoid rhabdoid tumor cutis laxa epileptic encephalopathy, infantile or early childhood, 3 lung carcinoma myopathy ovarian cancer Ehlers-Danlos syndrome Gaucher disease malignant ependymoma oligodendroglioma
GA [auth G]	Pharos: Q9Y5K8	Liver Cirrhosis, Experimental osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia astrocytic tumor glioblastoma large cell medulloblastoma lymphoplasmacytic lymphoma medulloblastoma ovarian cancer primitive neuroectodermal tumor atypical teratoid rhabdoid tumor malignant colon neoplasm oligodendroglioma pancreatic intraductal papillary-mucinous neoplasm tuberculosis Liver Cirrhosis, Experimental osteosarcoma pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia astrocytic tumor glioblastoma large cell medulloblastoma lymphoplasmacytic lymphoma medulloblastoma ovarian cancer primitive neuroectodermal tumor atypical teratoid rhabdoid tumor malignant colon neoplasm oligodendroglioma pancreatic intraductal papillary-mucinous neoplasm tuberculosis breast cancer dermatomyositis drug-induced liver injury lung cancer malignant ependymoma
HA [auth N]	Pharos: Q16864	atrial fibrillation myositis Sjogren syndrome ulcerative colitis dilated cardiomyopathy primary biliary cholangitis systemic lupus erythematosus Hodgkins lymphoma rheumatoid arthritis systemic sclerosis
IA [auth P]	Pharos: Q9UI12	astrocytic tumor large cell medulloblastoma medulloblastoma Pick disease primitive neuroectodermal tumor atypical teratoid rhabdoid tumor malignant ependymoma oligodendroglioma pilocytic astrocytoma glioblastoma malignant glioma ovarian cancer plasma cell myeloma
B [auth O]	Pharos: P21283	Pick disease psoriasis astrocytic tumor breast carcinoma hepatocellular carcinoma lung adenocarcinoma malignant glioma osteosarcoma pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma tuberculosis atypical teratoid rhabdoid tumor Gaucher disease invasive ductal breast carcinoma lung cancer Pick disease psoriasis astrocytic tumor breast carcinoma hepatocellular carcinoma lung adenocarcinoma malignant glioma osteosarcoma pancreatic intraductal papillary-mucinous carcinoma pilocytic astrocytoma tuberculosis atypical teratoid rhabdoid tumor Gaucher disease invasive ductal breast carcinoma lung cancer medulloblastoma ovarian cancer pancreatic intraductal papillary-mucinous neoplasm with low grade dysplasia primitive neuroectodermal tumor breast cancer glioblastoma large cell medulloblastoma malignant ependymoma oligodendroglioma pancreatic ductal adenocarcinoma
I [auth S]	Pharos: O15342	astrocytic tumor Down syndrome malignant ependymoma ovarian cancer plasma cell myeloma breast cancer glioblastoma malignant glioma pancreatic ductal adenocarcinoma subependymal giant cell astrocytoma dermatomyositis large cell medulloblastoma malignant pancreatic neoplasm pilocytic astrocytoma
K [auth U]	Pharos: Q15904	immunodeficiency 47 follicular lymphoma congenital disorder of glycosylation astrocytic tumor invasive ductal breast carcinoma Lymphoma, Follicular, Grade 3 plasma cell myeloma ovarian cancer subependymal giant cell astrocytoma cutis laxa immunodeficiency due to ficolin3 deficiency Pick disease
L [auth V]	Pharos: O75787	syndromic X-linked intellectual disability Hedera type X-linked parkinsonism-spasticity syndrome Parkinson disease intellectual disability Fibrosis malignant mesothelioma osteosarcoma Sjogren syndrome Alzheimer disease cutis laxa Emery-Dreifuss muscular dystrophy facioscapulohumeral muscular dystrophy lung adenocarcinoma myopathy ovarian cancer syndromic X-linked intellectual disability Hedera type X-linked parkinsonism-spasticity syndrome Parkinson disease intellectual disability Fibrosis malignant mesothelioma osteosarcoma Sjogren syndrome Alzheimer disease cutis laxa Emery-Dreifuss muscular dystrophy facioscapulohumeral muscular dystrophy lung adenocarcinoma myopathy ovarian cancer Pick disease amyotrophic lateral sclerosis congenital disorder of glycosylation dermatomyositis epilepsy juvenile dermatomyositis lung cancer neurodegenerative disease pancreatic ductal adenocarcinoma plasma cell myeloma breast cancer Duchenne muscular dystrophy IgA glomerulonephritis large cell medulloblastoma
M [auth 0]	Pharos: Q99437	acute myeloid leukemia breast carcinoma lymphoplasmacytic lymphoma plasma cell myeloma astrocytic tumor diabetes mellitus Malignant neoplasm of breast primary cutaneous T-cell non-Hodgkin lymphoma attention deficit hyperactivity disorder, inattentive type invasive ductal breast carcinoma ovarian cancer

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
A [auth R], AA [auth F], B [auth O], BA [auth D], C [auth J] A [auth R], AA [auth F], B [auth O], BA [auth D], C [auth J], CA [auth E], D [auth M], E [auth I], F [auth L], G [auth H], GA [auth G], H [auth K], HA [auth N], I [auth S], IA [auth P], J [auth T], K [auth U], L [auth V], M [auth 0], N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], S [auth 6], T [auth 7], U [auth 8], V [auth 9], W [auth Q], X [auth C], Y [auth A], Z [auth B]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: mpstruc mpstruc Database Homepage

Chains	Resource Link	Group	Subgroup	Protein
A [auth R], AA [auth F], B [auth O], BA [auth D], C [auth J] A [auth R], AA [auth F], B [auth O], BA [auth D], C [auth J], CA [auth E], D [auth M], E [auth I], F [auth L], G [auth H], GA [auth G], H [auth K], HA [auth N], I [auth S], IA [auth P], J [auth T], K [auth U], L [auth V], M [auth 0], N [auth 1], O [auth 2], P [auth 3], Q [auth 4], R [auth 5], S [auth 6], T [auth 7], U [auth 8], V [auth 9], W [auth Q], X [auth C], Y [auth A], Z [auth B]	mpstruc	TRANSMEMBRANE PROTEINS: ALPHA-HELICAL	Vacuolar ATPase (V-ATPase)	V-ATPase complete structure, state 1 with SidK and ADP