6XDC
Cryo-EM structure of SARS-CoV-2 ORF3a
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
B | SCOP2B Superfamily | SARS coronavirus viroporin, transmembrane domain | 8093337 | 3002697 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | SARS coronavirus Orf3/3a, C-terminal domain | 8093336 | 3002696 | SCOP2B (2022-06-29) |
A | SCOP2 Family | SARS coronavirus Orf3/3a viroporin | 8093335 | 4007803 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | SARS coronavirus viroporin, transmembrane domain | 8093337 | 3002697 | SCOP2 (2022-06-29) |
A | SCOP2 Superfamily | SARS coronavirus Orf3/3a, C-terminal domain | 8093336 | 3002696 | SCOP2 (2022-06-29) |
Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage
InterPro: Protein Family Classification InterPro Database Homepage
Chains | Accession | Name | Type |
---|---|---|---|
IPR046446 | 3a-like viroporin, cytosolic domain, alpha/betacoronavirus | Domain | |
IPR024407 | Protein 3a, betacoronavirus | Family | |
IPR046445 | 3a-like viroporin, transmembrane domain, alpha/betacoronavirus | Domain |
Membrane Protein Annotation: OPM OPM Database Homepage
Chains | External Link | Type | Class | Superfamily | Family |
---|---|---|---|---|---|
OPM | Transmembrane | Alpha-helical polytopic | Polytopic viroporins | Betacoronavirus viroporin 3a |
Membrane Protein Annotation: PDBTM PDBTM Database Homepage
Chains | External Link | Comment |
---|---|---|
PDBTM | Annotated as membrane protein by PDBTM |
Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage
Chains | External Link | Comment |
---|---|---|
MemProtMD | Annotated as membrane protein by MemProtMD |