6XKK | pdb_00006xkk

Cryo-EM structure of the NLRP1-CARD filament


Domain Annotation: ECOD Classification ECOD Database Homepage

ChainsFamily NameDomain Identifier ArchitecturePossible HomologyHomologyTopologyFamilyProvenance Source (Version)
Z [auth d]Ribosomal_L36e6xkkd1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
Y [auth c]Ribosomal_L36e6xkkc1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
X [auth b]Ribosomal_L36e6xkkb1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
W [auth a]Ribosomal_L36e6xkka1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
VRibosomal_L36e6xkkV1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
URibosomal_L36e6xkkU1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
TRibosomal_L36e6xkkT1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
SRibosomal_L36e6xkkS1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
RA [auth v]Ribosomal_L36e6xkkv1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
RRibosomal_L36e6xkkR1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
QA [auth u]Ribosomal_L36e6xkku1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
QRibosomal_L36e6xkkQ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
PA [auth t]Ribosomal_L36e6xkkt1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
PRibosomal_L36e6xkkP1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
OA [auth s]Ribosomal_L36e6xkks1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
ORibosomal_L36e6xkkO1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
NA [auth r]Ribosomal_L36e6xkkr1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
NRibosomal_L36e6xkkN1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
MA [auth q]Ribosomal_L36e6xkkq1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
MRibosomal_L36e6xkkM1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
LA [auth p]Ribosomal_L36e6xkkp1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
LRibosomal_L36e6xkkL1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
KA [auth o]Ribosomal_L36e6xkko1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
KRibosomal_L36e6xkkK1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
JA [auth n]Ribosomal_L36e6xkkn1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
JRibosomal_L36e6xkkJ1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
IA [auth m]Ribosomal_L36e6xkkm1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
IRibosomal_L36e6xkkI1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
HA [auth l]Ribosomal_L36e6xkkl1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
HRibosomal_L36e6xkkH1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
GA [auth k]Ribosomal_L36e6xkkk1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
GRibosomal_L36e6xkkG1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
FA [auth j]Ribosomal_L36e6xkkj1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
FRibosomal_L36e6xkkF1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
EA [auth i]Ribosomal_L36e6xkki1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
ERibosomal_L36e6xkkE1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
DA [auth h]Ribosomal_L36e6xkkh1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
DRibosomal_L36e6xkkD1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
CA [auth g]Ribosomal_L36e6xkkg1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
CRibosomal_L36e6xkkC1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
BA [auth f]Ribosomal_L36e6xkkf1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
BRibosomal_L36e6xkkB1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
AA [auth e]Ribosomal_L36e6xkke1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)
ARibosomal_L36e6xkkA1 A: a/b three-layered sandwichesX: CNF1/YfiH-like putative cysteine hydrolasesH: BromodomainT: BromodomainF: Ribosomal_L36ECOD (v294.1)

Protein Family Annotation Pfam Database Homepage

ChainsAccessionNameDescriptionCommentsSource
PF00619Caspase recruitment domain (CARD)Caspase recruitment domainMotif contained in proteins involved in apoptotic signaling. Predicted to possess a DEATH (Pfam:PF00531) domain-like fold . Domain

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

ChainsPolymerMolecular FunctionBiological ProcessCellular Component
NACHT, LRR and PYD domains-containing protein 1

InterPro: Protein Family Classification InterPro Database Homepage

ChainsAccessionNameType
IPR051249NLRP InflammasomeFamily
IPR027417P-loop containing nucleoside triphosphate hydrolaseHomologous Superfamily
IPR001611Leucine-rich repeatRepeat
IPR004020DAPIN domainDomain
IPR025307FIIND domainDomain
IPR007111NACHT nucleoside triphosphataseDomain
IPR011029Death-like domain superfamilyHomologous Superfamily
IPR033516CARD8/ASC/NALP1, CARD domainDomain
IPR041267NACHT, LRR and PYD domains-containing protein, helical domain HD2Domain
IPR041075NOD1/2, winged helix domainDomain
IPR032675Leucine-rich repeat domain superfamilyHomologous Superfamily
IPR001315CARD domainDomain

Pharos: Disease Associations Pharos Homepage Annotation