Annotations: 6YXR

Domain Annotation: SCOP2 Classification SCOP2 Database Homepage

Chains	Type	Family Name	Domain Identifier	Family Identifier	Provenance Source (Version)
G [auth C]	SCOP2B Superfamily	4Fe-4S ferredoxins	8093850	3000020	SCOP2B (2022-06-29)
F [auth B]	SCOP2B Superfamily	Photosystem I subunits PsaA/PsaB	8094505	3000850	SCOP2B (2022-06-29)
E [auth A]	SCOP2B Superfamily	Photosystem I subunits PsaA/PsaB	8094473	3000850	SCOP2B (2022-06-29)
C [auth 3]	SCOP2B Superfamily	Chlorophyll a-b binding protein	8097370	3000343	SCOP2B (2022-06-29)
K [auth J]	SCOP2B Superfamily	Subunit IX of photosystem I reaction centre, PsaJ	8094931	3000824	SCOP2B (2022-06-29)
A [auth 1]	SCOP2B Superfamily	Chlorophyll a-b binding protein	8097368	3000343	SCOP2B (2022-06-29)

Domain Annotation: ECOD Classification ECOD Database Homepage

Chains	Family Name	Domain Identifier	Architecture	Possible Homology	Homology	Topology	Family	Provenance Source (Version)
I [auth E]		e6yxrE1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
H [auth D]		e6yxrD1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
G [auth C]		e6yxrC1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
F [auth B]		e6yxrB1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
E [auth A]		e6yxrA1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
D [auth 4]		e6yxr41	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
C [auth 3]		e6yxr31	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
B [auth 2]		e6yxr21	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
K [auth J]		e6yxrJ1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
J [auth F]		e6yxrF1	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)
A [auth 1]		e6yxr11	A: Family A G protein-coupled receptor-like	X: Family A G protein-coupled receptor-like	H: Family A G protein-coupled receptor-like	T: RGM_N	F:	ECOD (20:10:01)

Domain Annotation: CATH CATH Database Homepage

Chain	Domain	Class	Architecture	Topology	Homology	Provenance Source (Version)
I [auth E]	2.30.30.50	Mainly Beta	Roll	SH3 type barrels.		CATH (utative)
H [auth D]	3.30.1470.10	Alpha Beta	2-Layer Sandwich	Photosystem 1 Reaction Centre Subunit Ii	Chain: D	CATH (utative)
G [auth C]	3.30.70.20	Alpha Beta	2-Layer Sandwich	Alpha-Beta Plaits		CATH (utative)
F [auth B]	1.20.1130.10	Mainly Alpha	Up-down Bundle	Photosystem I p700 chlorophyll A apoprotein A1	Photosystem I PsaA/PsaB	CATH (utative)
E [auth A]	1.20.1130.10	Mainly Alpha	Up-down Bundle	Photosystem I p700 chlorophyll A apoprotein A1	Photosystem I PsaA/PsaB	CATH (utative)
D [auth 4]	1.10.3460.10	Mainly Alpha	Orthogonal Bundle	Chlorophyll a-b binding protein	Chlorophyll a/b binding protein domain	CATH (utative)
C [auth 3]	1.10.3460.10	Mainly Alpha	Orthogonal Bundle	Chlorophyll a-b binding protein	Chlorophyll a/b binding protein domain	CATH (utative)
K [auth J]	1.20.5.510	Mainly Alpha	Up-down Bundle	Single alpha-helices involved in coiled-coils or other helix-helix interfaces	Single helix bin	CATH (utative)
J [auth F]	1.10.8.110	Mainly Alpha	Orthogonal Bundle	Helicase, Ruva Protein	domain 3	CATH (utative)
A [auth 1]	1.10.3460.10	Mainly Alpha	Orthogonal Bundle	Chlorophyll a-b binding protein	Chlorophyll a/b binding protein domain	CATH (utative)

Gene Ontology: Gene Product Annotation Gene Ontology Database Homepage

Chains	Polymer	Molecular Function	Biological Process	Cellular Component
I [auth E]	PsaE	-	-	-
H [auth D]	PsaD	-	-	-
G [auth C]	Photosystem I iron-sulfur center	oxidoreductase activity catalytic activity iron-sulfur cluster binding binding 4 iron, 4 sulfur cluster binding metal cluster binding small molecule binding electron transfer activity cation binding ion binding metal ion binding	photosynthesis photosynthesis, light reaction photosynthetic electron transport chain electron transport chain metabolic process cellular process generation of precursor metabolites and energy photosynthetic electron transport in photosystem I	chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope thylakoid chloroplast membrane intracellular membraneless organelle intracellular membrane-bounded organelle thylakoid membrane organelle chloroplast thylakoid outer membrane cytoplasm photosynthetic membrane organelle membrane protein-containing complex photosystem photosystem I membrane protein complex
F [auth B]	Photosystem I P700 chlorophyll a apoprotein A2	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding oxidoreductase activity catalytic activity iron-sulfur cluster binding 4 iron, 4 sulfur cluster binding metal cluster binding chlorophyll binding tetrapyrrole binding electron transfer activity	photosynthesis metabolic process cellular process	chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope thylakoid chloroplast membrane intracellular membraneless organelle intracellular membrane-bounded organelle thylakoid membrane organelle chloroplast thylakoid outer membrane cytoplasm photosynthetic membrane organelle membrane protein-containing complex photosystem photosystem I membrane protein complex
E [auth A]	Photosystem I P700 chlorophyll a apoprotein A1	cation binding magnesium ion binding ion binding binding metal ion binding small molecule binding oxidoreductase activity catalytic activity iron-sulfur cluster binding 4 iron, 4 sulfur cluster binding metal cluster binding chlorophyll binding tetrapyrrole binding electron transfer activity	photosynthesis metabolic process cellular process	chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope thylakoid chloroplast membrane intracellular membraneless organelle intracellular membrane-bounded organelle thylakoid membrane organelle chloroplast thylakoid outer membrane cytoplasm photosynthetic membrane organelle membrane protein-containing complex photosystem photosystem I membrane protein complex
D [auth 4]	Lhca4	-	-	-
C [auth 3]	Chlorophyll a-b binding protein, chloroplastic	chlorophyll binding binding tetrapyrrole binding	photosynthesis photosynthesis, light reaction photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane photosystem I
B [auth 2]	Lhca2	-	-	-
K [auth J]	Photosystem I reaction center subunit IX	-	photosynthesis metabolic process cellular process	chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope chloroplast thylakoid membrane membrane-bounded organelle plastid membrane intracellular anatomical structure plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid intracellular organelle organelle envelope cellular anatomical structure bounding membrane of organelle membraneless organelle plastid envelope thylakoid chloroplast membrane intracellular membraneless organelle intracellular membrane-bounded organelle thylakoid membrane organelle chloroplast thylakoid outer membrane cytoplasm photosynthetic membrane organelle membrane protein-containing complex photosystem photosystem I membrane protein complex
J [auth F]	PsaF	-	-	-
A [auth 1]	Chlorophyll a-b binding protein, chloroplastic	chlorophyll binding binding tetrapyrrole binding	photosynthesis photosynthesis, light reaction photosynthesis, light harvesting metabolic process cellular process generation of precursor metabolites and energy	protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane protein-containing complex photosystem intracellular anatomical structure photosystem II membrane membrane protein complex intracellular membraneless organelle intracellular organelle cellular anatomical structure organelle membraneless organelle photosynthetic membrane thylakoid chloroplast thylakoid membrane membrane-bounded organelle plastid membrane plastid organelle outer membrane plastid thylakoid membrane plastid thylakoid organelle envelope bounding membrane of organelle plastid envelope chloroplast intracellular membrane-bounded organelle thylakoid membrane chloroplast thylakoid outer membrane cytoplasm organelle membrane photosystem I

InterPro: Protein Family Classification InterPro Database Homepage

Chains	Accession	Name	Type
G [auth C]	IPR017900	4Fe-4S ferredoxin, iron-sulphur binding, conserved site	Conserved Site
G [auth C]	IPR050157	Photosystem I iron-sulfur center	Family
G [auth C]	IPR017896	4Fe-4S ferredoxin-type, iron-sulphur binding domain	Domain
G [auth C]	IPR017491	Photosystem I protein PsaC	Family
F [auth B]	IPR036408	Photosystem I PsaA/PsaB superfamily	Homologous Superfamily
F [auth B]	IPR001280	Photosystem I PsaA/PsaB	Family
F [auth B]	IPR006244	Photosystem I PsaB	Family
F [auth B]	IPR020586	Photosystem I PsaA/PsaB, conserved site	Conserved Site
E [auth A]	IPR006243	Photosystem I PsaA	Family
E [auth A]	IPR036408	Photosystem I PsaA/PsaB superfamily	Homologous Superfamily
E [auth A]	IPR001280	Photosystem I PsaA/PsaB	Family
E [auth A]	IPR020586	Photosystem I PsaA/PsaB, conserved site	Conserved Site
C [auth 3]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
C [auth 3]	IPR022796	Chlorophyll A-B binding protein	Family
K [auth J]	IPR002615	Photosystem I PsaJ, reaction centre subunit IX	Family
K [auth J]	IPR036062	Photosystem I PsaJ, reaction centre subunit IX superfamily	Homologous Superfamily
A [auth 1]	IPR001344	Chlorophyll A-B binding protein, plant and chromista	Family
A [auth 1]	IPR022796	Chlorophyll A-B binding protein	Family

Membrane Protein Annotation: OPM OPM Database Homepage

Chains	External Link	Type	Class	Superfamily	Family
E [auth A], F [auth B], G [auth C], K [auth J]	OPM	Transmembrane	Alpha-helical polytopic	Photosystems	Photosystem I

Membrane Protein Annotation: PDBTM PDBTM Database Homepage

Chains	External Link	Comment
E [auth A], F [auth B], G [auth C], K [auth J]	PDBTM	Annotated as membrane protein by PDBTM

Membrane Protein Annotation: MemProtMD MemProtMD Database Homepage

Chains	External Link	Comment
E [auth A], F [auth B], G [auth C], K [auth J]	MemProtMD	Annotated as membrane protein by MemProtMD

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.