Mbf1-ribosome complex
Domain Annotation: SCOP/SCOPe Classification SCOP-e Database Homepage
| Chains | Domain Info | Class | Fold | Superfamily | Family | Domain | Species | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| HA [auth R] | d6zvir_ | All beta proteins | 7-bladed beta-propeller | WD40 repeat-like | automated matches | automated matches | (Saccharomyces cerevisiae ) [TaxId: 4932 ], | SCOPe (2.08) |
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
| Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
|---|---|---|---|---|---|
| E [auth i] | SCOP2B Superfamily | SIS domain/Ribosomal protein S2-like | 8061280 | 3001397 | SCOP2B (2022-06-29) |
| F [auth j] | SCOP2B Superfamily | Ribosomal S3Ae-like | 8053211 | 3002166 | SCOP2B (2022-06-29) |
| I [auth m] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052759 | 3000135 | SCOP2B (2022-06-29) |
| I [auth m] | SCOP2B Superfamily | Alpha-L RNA-binding motif | 8052758 | 3001473 | SCOP2B (2022-06-29) |
| I [auth m] | SCOP2B Superfamily | Translation proteins SH3-like KOW motif containing domain | 8052760 | 3000334 | SCOP2B (2022-06-29) |
| J [auth n] | SCOP2B Superfamily | Ribosomal protein S7 | 8065993 | 3000799 | SCOP2B (2022-06-29) |
| K [auth o] | SCOP2B Superfamily | GS N-terminal domain-like | 8053173 | 3000408 | SCOP2B (2022-06-29) |
| M [auth q] | SCOP2B Superfamily | 50S Ribosomal protein L14-like | 8053083 | 3000433 | SCOP2B (2022-06-29) |
| O [auth s] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8055713 | 3000034 | SCOP2B (2022-06-29) |
| P [auth t] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8052738 | 3000135 | SCOP2B (2022-06-29) |
| P [auth t] | SCOP2B Superfamily | Ribosomal S17 N-terminal domain-like | 8052736 | 3002138 | SCOP2B (2022-06-29) |
| Q [auth u] | SCOP2 Family | L30e/L7ae ribosomal proteins | 8096945 | 4001513 | SCOP2 (2022-06-29) |
| Q [auth u] | SCOP2 Superfamily | L30e-like | 8096946 | 3001739 | SCOP2 (2022-06-29) |
| R [auth v] | SCOP2B Superfamily | Homeodomain-like | 8052973 | 3000001 | SCOP2B (2022-06-29) |
| R [auth v] | SCOP2B Superfamily | S15/NS1 RNA-binding domain | 8052974 | 3001284 | SCOP2B (2022-06-29) |
| S [auth x] | SCOP2B Superfamily | Ribosomal protein S19 | 8086076 | 3000686 | SCOP2B (2022-06-29) |
| T [auth y] | SCOP2B Superfamily | Ribosomal protein S5 domain 2-like | 8103366 | 3000100 | SCOP2B (2022-06-29) |
| V [auth A] | SCOP2B Superfamily | S13-like H2TH domain | 8098450 | 3000053 | SCOP2B (2022-06-29) |
| X [auth C] | SCOP2B Superfamily | Ribosomal protein S10 | 8098648 | 3001336 | SCOP2B (2022-06-29) |
| Y [auth D] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8053136 | 3000068 | SCOP2B (2022-06-29) |
| Z [auth E] | SCOP2 Family | Ribosomal protein S8 | 8096921 | 4002027 | SCOP2 (2022-06-29) |
| Z [auth E] | SCOP2 Superfamily | Ribosomal protein S8 | 8096922 | 3000709 | SCOP2 (2022-06-29) |
| CA [auth J] | SCOP2B Superfamily | Winged helix DNA-binding domain | 8059235 | 3000034 | SCOP2B (2022-06-29) |
| EA [auth N] | SCOP2B Superfamily | Nucleic acid-binding proteins | 8063430 | 3000135 | SCOP2B (2022-06-29) |
| JA [auth O] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8052569 | 3000068 | SCOP2B (2022-06-29) |
| KA [auth w] | SCOP2B Superfamily | Translational machinery components | 8098660 | 3000571 | SCOP2B (2022-06-29) |
| LA [auth K] | SCOP2B Superfamily | Glucocorticoid receptor-like (DNA-binding domain) | 8053149 | 3000068 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
| Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
|---|---|---|---|---|---|---|---|---|
| E [auth i] | e6zvii1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| F [auth j] | e6zvij1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| G [auth k] | e6zvik1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| H [auth l] | e6zvil1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| I [auth m] | e6zvim1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| J [auth n] | e6zvin1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| K [auth o] | e6zvio1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| L [auth p] | e6zvip1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| M [auth q] | e6zviq1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| N [auth r] | e6zvir1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| O [auth s] | e6zvis1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| P [auth t] | e6zvit1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| Q [auth u] | e6zviu1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| R [auth v] | e6zviv1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| S [auth x] | e6zvix1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| T [auth y] | e6zviy1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| U [auth z] | e6zviz1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| V [auth A] | e6zviA1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| W [auth B] | e6zviB1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| X [auth C] | e6zviC1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| Y [auth D] | e6zviD1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| Z [auth E] | e6zviE1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| AA [auth H] | e6zviH1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| BA [auth I] | e6zviI1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| CA [auth J] | e6zviJ1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| DA [auth L] | e6zviL1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| EA [auth N] | e6zviN1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| FA [auth P] | e6zviP1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| GA [auth Q] | e6zviQ1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| HA [auth R] | e6zviR1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| IA [auth T] | e6zviT01 | A: Rossmann-like | X: Rossmann-related | H: FAD/NAD(P)-binding domain | T: Ribosomal_L16 | F: | ECOD (20:10:01) | |
| JA [auth O] | e6zviO1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| KA [auth w] | e6zviw1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) | |
| LA [auth K] | e6zviK1 | A: Family A G protein-coupled receptor-like | X: Family A G protein-coupled receptor-like | H: Family A G protein-coupled receptor-like | T: Pro_isomerase | F: | ECOD (20:10:01) |
Domain Annotation: CATH CATH Database Homepage
| Chain | Domain | Class | Architecture | Topology | Homology | Provenance Source (Version) |
|---|---|---|---|---|---|---|
| G [auth k] | 3.30.160.20 | Alpha Beta | 2-Layer Sandwich | Double Stranded RNA Binding Domain | CATH (utative) | |
| G [auth k] | 3.30.230.10 | Alpha Beta | 2-Layer Sandwich | Ribosomal Protein S5 | domain 2 | CATH (utative) |
| H [auth l] | 3.30.300.20 | Alpha Beta | 2-Layer Sandwich | GMP Synthetase | Chain A, domain 3 | CATH (utative) |
| S [auth x] | 3.30.860.10 | Alpha Beta | 2-Layer Sandwich | 30s Ribosomal Protein S19 | Chain A | CATH (utative) |
Protein Family Annotation Pfam Database Homepage
| Chains | Accession | Name | Description | Comments | Source |
|---|---|---|---|---|---|
| V [auth A] | PF00416 | Ribosomal protein S13/S18 (Ribosomal_S13) | Ribosomal protein S13/S18 | - | Family |
| W [auth B] | PF01090 | Ribosomal protein S19e (Ribosomal_S19e) | Ribosomal protein S19e | - | Family |
| X [auth C] | PF00338 | Ribosomal protein S10p/S20e (Ribosomal_S10) | Ribosomal protein S10p/S20e | This family includes small ribosomal subunit S10 from prokaryotes and S20 from eukaryotes. | Domain |
| Y [auth D] | PF01249 | Ribosomal protein S21e (Ribosomal_S21e) | Ribosomal protein S21e | - | Family |
| Z [auth E] | PF00410 | Ribosomal protein S8 (Ribosomal_S8) | Ribosomal protein S8 | Domain | |
| AA [auth H] | PF00164 | Ribosomal protein S12/S23 (Ribosom_S12_S23) | Ribosomal protein S12/S23 | This protein is known as S12 in bacteria and archaea and S23 in eukaryotes. | Domain |
| BA [auth I] | PF00318 | Ribosomal protein S2 (Ribosomal_S2) | Ribosomal protein S2 | - | Family |
| BA [auth I] | PF01282 | Ribosomal protein S24e (Ribosomal_S24e) | Ribosomal protein S24e | - | Family |
| CA [auth J] | PF03297 | S25 ribosomal protein (Ribosomal_S25) | S25 ribosomal protein | - | Family |
| DA [auth L] | PF01667 | Ribosomal protein S27 (Ribosomal_S27e) | Ribosomal protein S27 | - | Family |
| DA [auth L] | PF07650 | KH domain (KH_2) | KH domain | Domain | |
| EA [auth N] | PF01200 | Ribosomal protein S28e (Ribosomal_S28e) | Ribosomal protein S28e | Domain | |
| EA [auth N] | PF00177 | Ribosomal protein S7p/S5e (Ribosomal_S7) | Ribosomal protein S7p/S5e | This family contains ribosomal protein S7 from prokaryotes and S5 from eukaryotes. | Domain |
| FA [auth P] | PF04758 | Ribosomal protein S30 (Ribosomal_S30) | Ribosomal protein S30 | - | Family |
| FA [auth P] | PF01251 | Ribosomal protein S7e (Ribosomal_S7e) | Ribosomal protein S7e | - | Family |
| GA [auth Q] | PF01599 | Ribosomal protein S27a (Ribosomal_S27) | Ribosomal protein S27a | This family of ribosomal proteins consists mainly of the 40S ribosomal protein S27a which is synthesised as a C-terminal extension of ubiquitin (CEP). The S27a domain compromises the C-terminal half of the protein. The synthesis of ribosomal proteins ... | Domain |
| HA [auth R] | PF01479 | S4 domain (S4) | S4 domain | The S4 domain is a small domain consisting of 60-65 amino acid residues that was detected in the bacterial ribosomal protein S4, eukaryotic ribosomal S9, two families of pseudouridine synthases, a novel family of predicted RNA methylases, a yeast pro ... | Domain |
| HA [auth R] | PF00400 | WD domain, G-beta repeat (WD40) | WD domain, G-beta repeat | - | Repeat |
| IA [auth T] | PF01381 | Helix-turn-helix (HTH_3) | Helix-turn-helix | This large family of DNA binding helix-turn helix proteins includes Cro Swiss:P03036 and CI Swiss:P03034. Within the protein Swiss:Q5F9C2, the full protein fold incorporates a helix-turn-helix motif, but the function of this member is unlikely to be ... | Domain |
| IA [auth T] | PF08523 | Multiprotein bridging factor 1 (MBF1) | Multiprotein bridging factor 1 | - | Family |
| IA [auth T] | PF00366 | Ribosomal protein S17 (Ribosomal_S17) | Ribosomal protein S17 | Domain | |
| JA [auth O] | PF00253 | Ribosomal protein S14p/S29e (Ribosomal_S14) | Ribosomal protein S14p/S29e | - | Family |
| LA [auth K] | PF01283 | Ribosomal protein S26e (Ribosomal_S26e) | Ribosomal protein S26e | - | Family |
| LA [auth K] | PF00333 | Ribosomal protein S5, N-terminal domain (Ribosomal_S5) | Ribosomal protein S5, N-terminal domain | Domain |














